| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is ptsA [H]
Identifier: 28198539
GI number: 28198539
Start: 780209
End: 781936
Strand: Reverse
Name: ptsA [H]
Synonym: PD0631
Alternate gene names: 28198539
Gene position: 781936-780209 (Counterclockwise)
Preceding gene: 28198540
Following gene: 28198538
Centisome position: 31.03
GC content: 54.46
Gene sequence:
>1728_bases ATGAATGTGCGCCTCCAGGGCCACGGCGCAGCACGAGGCACTGCACTGGGGCGCGCCTGGGTCCGTCAGATGAACATCAT CGAAATCCAGGATAAATACATCACTGACACTAACGCCGAATTACATAGCTTGTACCAAGCCATGAGCGCAGCACGTCAGG AAATACAAGTACTGCGAGAACGCATGCATGGCACCTTGTCCCACGAAGTCGGCGAGTTTCTCGACCTATACACACTGTTG ATCGATGACCCTGAGCTACTACGGAGCCTGAACGAACTCATCCTCACTCACAACTACAGTGCCGAATACGCGCTGAAAAT ACAGCGCGACCGCCTCACCACAGAATTCGAAGCCATGGAAGACCACTACCTGAAAAGTCGCATGGACGACCTGAATCACG TGCTAGGACGCATCCACGCCTTTCTAAAAAAACACTCCCCCGAACCCAAAGATGCTGCAGGTGAAATCCTCATCTGCAAC AACATCGCCCCATCCGAATTGGCCCAAGTACAAGCCCAAGGCATTATTGGAATCGTCATCGCGGCTGGCAATACACTCTC GCACAGCGCCATCCTGGCGCATAGCTTGCACCTGCCACTGATCGTTGGTGCAGGAGAGCTGCTGCTACAAAAGATCACCA ACGGCGACATGCTGATCATCGATGGCAACAGCGGAGAAATCATTGTCAATCCATCGCCACAGGACCTGCGTCACTACCAT AGCCGACTGCGCGAACGCGCCAAAGAACAACGTGAGCTGGAACAACTACGCTCTAAACACAGCCGCACTCGCGACAACGT CGACATTGTCGTACAGGCCAACGCAGAATCACCGGACGATGTCTCCCAAGCATACGCACTGGGCGCGGCCGGTGTGGGCC TGTACCGCACTGAATTCCTGTTTCTGCAACGCAACAAACTGCCGGACGAAGAAGAACAGTTCCAAACATACCGCGACACT GTACTACGTATGAACGGACGCCCAGTCACCATCCGCACATTAGATCTGGGTGCAGATAAAACCGACTGTACCGGCCTGAC TCTCAGTAACGAAGAAAACCCAGCAATGGGCCTGCGTGGGATACGCCTGTCGATGGCACACCCCGCAGTGGCCAACACAC AATTACGAGCGATCCTGCGCACCTCCACCTATGGGCATGTCCGTATCTTGGTCCCCATGGTTAGCTGCCGAGAAGAGATC ATCCTTCTACGCAAGCAGATCAAAGCGCTCAGCATCCAATTGCGCACCGAAGGCCACGACATTGCCGAGCAGGTTCCACT AGGAGCGATGATCGAAGTACCAGCTGCAGCAATCGCACTCAACAGCTTTATCAAAGAAATCGACTTCCTATCGATCGGTA CCAACGACCTGGTCCAATACCTATTGGCCGCCGACCGCAACAATGCGGCAATCAGCGAAATATACTCCCCACTCCACCCT GGCGTCCTGGCAGTACTGGCTCAGATCATCGTCACCGCACATACACATGCCACCCCTGTCGCCATCTGCGGTGAAATCGC TGGCGATCCACATTACGTGCCCATGCTTCTGGCATTAGGTCTCACAGAATTCAGCCTTCACCCGGCCACATTACTTGAAG TACGCCGTGCAATCCGCAACAGCGACCTGGGCACATTGAAAACAAGTGTAACCACACTGCTCCGCGCACGCGACCGGAAG AGCATCGAAGAATGGATGGCGGCACACGCCAATACGACACCGACATAA
Upstream 100 bases:
>100_bases GAGTGAACTGTTCGAAAACCGCTTCAACGAGGACACATAAAGAGCACAGATAAACATGCCCCACTCCGCTCATCGCCCCA CCCCCACACTGCACACACAG
Downstream 100 bases:
>100_bases TGCCACCATCGCTACCGGACGCTTATCTGGTCATCCTATTGAAAGACAATAATGAAGATTGATTGAATCCAACCGTACCC TTTGGGAACGGTCCATTTTT
Product: phosphotransferase system enzyme I
Products: NA
Alternate protein names: Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MNVRLQGHGAARGTALGRAWVRQMNIIEIQDKYITDTNAELHSLYQAMSAARQEIQVLRERMHGTLSHEVGEFLDLYTLL IDDPELLRSLNELILTHNYSAEYALKIQRDRLTTEFEAMEDHYLKSRMDDLNHVLGRIHAFLKKHSPEPKDAAGEILICN NIAPSELAQVQAQGIIGIVIAAGNTLSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYH SRLRERAKEQRELEQLRSKHSRTRDNVDIVVQANAESPDDVSQAYALGAAGVGLYRTEFLFLQRNKLPDEEEQFQTYRDT VLRMNGRPVTIRTLDLGADKTDCTGLTLSNEENPAMGLRGIRLSMAHPAVANTQLRAILRTSTYGHVRILVPMVSCREEI ILLRKQIKALSIQLRTEGHDIAEQVPLGAMIEVPAAAIALNSFIKEIDFLSIGTNDLVQYLLAADRNNAAISEIYSPLHP GVLAVLAQIIVTAHTHATPVAICGEIAGDPHYVPMLLALGLTEFSLHPATLLEVRRAIRNSDLGTLKTSVTTLLRARDRK SIEEWMAAHANTTPT
Sequences:
>Translated_575_residues MNVRLQGHGAARGTALGRAWVRQMNIIEIQDKYITDTNAELHSLYQAMSAARQEIQVLRERMHGTLSHEVGEFLDLYTLL IDDPELLRSLNELILTHNYSAEYALKIQRDRLTTEFEAMEDHYLKSRMDDLNHVLGRIHAFLKKHSPEPKDAAGEILICN NIAPSELAQVQAQGIIGIVIAAGNTLSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYH SRLRERAKEQRELEQLRSKHSRTRDNVDIVVQANAESPDDVSQAYALGAAGVGLYRTEFLFLQRNKLPDEEEQFQTYRDT VLRMNGRPVTIRTLDLGADKTDCTGLTLSNEENPAMGLRGIRLSMAHPAVANTQLRAILRTSTYGHVRILVPMVSCREEI ILLRKQIKALSIQLRTEGHDIAEQVPLGAMIEVPAAAIALNSFIKEIDFLSIGTNDLVQYLLAADRNNAAISEIYSPLHP GVLAVLAQIIVTAHTHATPVAICGEIAGDPHYVPMLLALGLTEFSLHPATLLEVRRAIRNSDLGTLKTSVTTLLRARDRK SIEEWMAAHANTTPT >Mature_575_residues MNVRLQGHGAARGTALGRAWVRQMNIIEIQDKYITDTNAELHSLYQAMSAARQEIQVLRERMHGTLSHEVGEFLDLYTLL IDDPELLRSLNELILTHNYSAEYALKIQRDRLTTEFEAMEDHYLKSRMDDLNHVLGRIHAFLKKHSPEPKDAAGEILICN NIAPSELAQVQAQGIIGIVIAAGNTLSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYH SRLRERAKEQRELEQLRSKHSRTRDNVDIVVQANAESPDDVSQAYALGAAGVGLYRTEFLFLQRNKLPDEEEQFQTYRDT VLRMNGRPVTIRTLDLGADKTDCTGLTLSNEENPAMGLRGIRLSMAHPAVANTQLRAILRTSTYGHVRILVPMVSCREEI ILLRKQIKALSIQLRTEGHDIAEQVPLGAMIEVPAAAIALNSFIKEIDFLSIGTNDLVQYLLAADRNNAAISEIYSPLHP GVLAVLAQIIVTAHTHATPVAICGEIAGDPHYVPMLLALGLTEFSLHPATLLEVRRAIRNSDLGTLKTSVTTLLRARDRK SIEEWMAAHANTTPT
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=549, Percent_Identity=34.7905282331512, Blast_Score=313, Evalue=2e-86, Organism=Escherichia coli, GI1789193, Length=549, Percent_Identity=32.0582877959927, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI1788726, Length=539, Percent_Identity=30.4267161410019, Blast_Score=256, Evalue=3e-69, Organism=Escherichia coli, GI48994992, Length=414, Percent_Identity=32.1256038647343, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1787994, Length=401, Percent_Identity=23.6907730673317, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI226510935, Length=193, Percent_Identity=28.4974093264249, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 63772; Mature: 63772
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRLQGHGAARGTALGRAWVRQMNIIEIQDKYITDTNAELHSLYQAMSAARQEIQVLRE CCEEEECCCCCCHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHH RMHGTLSHEVGEFLDLYTLLIDDPELLRSLNELILTHNYSAEYALKIQRDRLTTEFEAME HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHH DHYLKSRMDDLNHVLGRIHAFLKKHSPEPKDAAGEILICNNIAPSELAQVQAQGIIGIVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEE AAGNTLSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYH ECCCCCCHHHHHHHHCCCCEEECCHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHH SRLRERAKEQRELEQLRSKHSRTRDNVDIVVQANAESPDDVSQAYALGAAGVGLYRTEFL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHEE FLQRNKLPDEEEQFQTYRDTVLRMNGRPVTIRTLDLGADKTDCTGLTLSNEENPAMGLRG EEECCCCCCHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC IRLSMAHPAVANTQLRAILRTSTYGHVRILVPMVSCREEIILLRKQIKALSIQLRTEGHD EEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCH IAEQVPLGAMIEVPAAAIALNSFIKEIDFLSIGTNDLVQYLLAADRNNAAISEIYSPLHP HHHHCCCCCEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHHHHHHCCCC GVLAVLAQIIVTAHTHATPVAICGEIAGDPHYVPMLLALGLTEFSLHPATLLEVRRAIRN HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHCC SDLGTLKTSVTTLLRARDRKSIEEWMAAHANTTPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNVRLQGHGAARGTALGRAWVRQMNIIEIQDKYITDTNAELHSLYQAMSAARQEIQVLRE CCEEEECCCCCCHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHH RMHGTLSHEVGEFLDLYTLLIDDPELLRSLNELILTHNYSAEYALKIQRDRLTTEFEAME HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHH DHYLKSRMDDLNHVLGRIHAFLKKHSPEPKDAAGEILICNNIAPSELAQVQAQGIIGIVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEE AAGNTLSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYH ECCCCCCHHHHHHHHCCCCEEECCHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHH SRLRERAKEQRELEQLRSKHSRTRDNVDIVVQANAESPDDVSQAYALGAAGVGLYRTEFL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHEE FLQRNKLPDEEEQFQTYRDTVLRMNGRPVTIRTLDLGADKTDCTGLTLSNEENPAMGLRG EEECCCCCCHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC IRLSMAHPAVANTQLRAILRTSTYGHVRILVPMVSCREEIILLRKQIKALSIQLRTEGHD EEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCH IAEQVPLGAMIEVPAAAIALNSFIKEIDFLSIGTNDLVQYLLAADRNNAAISEIYSPLHP HHHHCCCCCEEHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHHHHHHCCCC GVLAVLAQIIVTAHTHATPVAICGEIAGDPHYVPMLLALGLTEFSLHPATLLEVRRAIRN HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHCC SDLGTLKTSVTTLLRARDRKSIEEWMAAHANTTPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]