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The map label for this gene is ytsP [H]

Identifier: 28198418

GI number: 28198418

Start: 609440

End: 609928

Strand: Reverse

Name: ytsP [H]

Synonym: PD0506

Alternate gene names: 28198418

Gene position: 609928-609440 (Counterclockwise)

Preceding gene: 28198425

Following gene: 28198417

Centisome position: 24.21

GC content: 53.37

Gene sequence:

>489_bases
TTGCTGATGCTGGCTCCTTTCATACTCACCGGGAATAAGCCAGAGCAGTACGCGCAACTTGAGGCCCAGGCCAAAGCACT
GATACATGGTGAGACCGACAGGATTGCGAATGCCGCTAATCTTGCAGCACTCATCTTTCATAGTCTGCCTGGGCTGAATT
GGGTCGGCTTCTATTTCTACGATGGGCGTGAATTGGTCGTTGGTCCATTTCAAGGATTACCCGCTTGTATACGCATCCCA
CTGGACAAAGGTGTCTGTGGTGCTGCTGCACGTACGCAGCGCACGCAACGGATTGACGACGTGGACACATTCCCTGATCA
CATCGCTTGCGACTCGGCCTCACGCTCTGAACTGGTGGTGCCATTACTCAAAGACAACACCCTGATCGGTGTGCTGGATC
TGGACAGTCCAACATGTGCTCGCTTCGATAGTGACGACCAGACGGGGATTGAATCGCTGGCGCGCGTGTTCGTTAGCAAT
TTAAGGTGA

Upstream 100 bases:

>100_bases
ATCGATATTTGAATCGGTGCTTCGGGCTTTATAACTCATGAAGATTGACATACATAAAAATAAAGCTTCGGCACATGCCC
ATCACACATTCCAATAGGCT

Downstream 100 bases:

>100_bases
AAGTGGTTGCCATCTATGGCACAACATCGCTCCAAAGAGCACGCCCTAGTTTCGTCAAGTCGACCTATCCGCATCTTTGT
TAACATCCGCCATGTTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLMLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIP
LDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSN
LR

Sequences:

>Translated_162_residues
MLMLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIP
LDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSN
LR
>Mature_162_residues
MLMLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFYDGRELVVGPFQGLPACIRIP
LDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVVPLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSN
LR

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=142, Percent_Identity=49.2957746478873, Blast_Score=148, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6322781, Length=153, Percent_Identity=40.5228758169935, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17672; Mature: 17672

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFY
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
DGRELVVGPFQGLPACIRIPLDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVV
CCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEE
PLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR
EEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLMLAPFILTGNKPEQYAQLEAQAKALIHGETDRIANAANLAALIFHSLPGLNWVGFYFY
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
DGRELVVGPFQGLPACIRIPLDKGVCGAAARTQRTQRIDDVDTFPDHIACDSASRSELVV
CCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEE
PLLKDNTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSNLR
EEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]