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The map label for this gene is yueF [H]

Identifier: 28198155

GI number: 28198155

Start: 291232

End: 292395

Strand: Reverse

Name: yueF [H]

Synonym: PD0227

Alternate gene names: 28198155

Gene position: 292395-291232 (Counterclockwise)

Preceding gene: 28198156

Following gene: 28198154

Centisome position: 11.6

GC content: 52.58

Gene sequence:

>1164_bases
GTGCTTGGACGCACTCAGTCACCGATCATTCCCCTTTCTGATTCTGTCCACCCCATGACCGATCAGCCGACACACAACAA
CTGCACCAACGATGCAATCAAGCGTCGACGCTCGCCACTGACGGCACGCCCCCAAGCTCCACTGTCACTCGTTGTATTAG
CAACATTGGCAGTAGGTTACACACTGTGGGCTACACAGGCAGTGATCCTTCCCGTATTACTGGCTGTATTCTTCGCCCTA
GTAGGCAACCCCATCCTACGCGCACTGGGTCATATACGGATTCCACGCGCCATTGGGGCGTTGCTGTTGTTGTGCTTGGG
AATCAGCGGGACAGTGGTGCTAAGTGTAGAACTCGCGGGACCAGCCAGCGAATGGATACAACAAGCACCGGACAAAATAC
GCCAAGTAGCACGCCAAGTACGCCACCTTACCAGACCGATGCAACAAGCCAATCAAGCAGTAGAAAGCTTGGCACGCGCA
GCCGATGGTGAAACCGAACGCCAGTCCCAGATTGTGCGCACCCGCCTATACAACCCTTACACCGTACTGATGGACACACA
CAAACTGGTCATCTCGGTCTTGGGAGTGATCCTATTGACGTTCTTCTTCATGGTTTTTGGGGAGAAGCTGCAACGCAAAG
CGATTGCACTGCTCCCAAACCATCATCAACAACGTTTCACCGCCTCAATCCTACGCAACCTGGAACACGAGATCTCACGC
TATGTACTGACTATCAGCGTGATAAACGCCCTCGTCGGCTTGATATTCAGCGGTTTACTGTTGCTACTAAGCATTCCGCT
GCAAGAAGCACTGCTATGGGGCACAGTGGTTGCCCTACTTAACTTTGCACCATATGTAGGGCCGCTCATTGGTGTATTGC
TGATGCTACTCATCGGCTTAGTACAATTTCATGAATCCAGTAGAGCATTACTACCGGCACTGCTGTATCTGATGCTACAC
ACGCTGGAAGGGCAACTCATCACACCAATCATCCTCGGGCACCGCATGGCGATCTCGCCACTCATGTTGATCGTGGCATT
GCTACTGTTCGGCTCCCTGTGGGGACTCATTGGCCTCTTGCTGGCAGTACCGATGCTTGTATGCATCAAGATGGTGATGA
GCCGAATTGAGGACTTGCAGCGCTGGTCACGACTGTTGGAATAA

Upstream 100 bases:

>100_bases
AAGCCCAGCACCGAGGAAAGCCACACAACCACCACATCACAACCTACAGCAGACATAATCAACCTATCCGAACACGCCTG
AACCCGCTACATGTAGGCCG

Downstream 100 bases:

>100_bases
CGCATCACTCCAAGTACATGACATCCCTTCGGACGCTTACAAATATTTCCCCCTGAACAGGGTAGTACAGCGCACAACGC
CCCCATCGCCACATCTGACT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLGRTQSPIIPLSDSVHPMTDQPTHNNCTNDAIKRRRSPLTARPQAPLSLVVLATLAVGYTLWATQAVILPVLLAVFFAL
VGNPILRALGHIRIPRAIGALLLLCLGISGTVVLSVELAGPASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESLARA
ADGETERQSQIVRTRLYNPYTVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIALLPNHHQQRFTASILRNLEHEISR
YVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVVALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLH
TLEGQLITPIILGHRMAISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMVMSRIEDLQRWSRLLE

Sequences:

>Translated_387_residues
MLGRTQSPIIPLSDSVHPMTDQPTHNNCTNDAIKRRRSPLTARPQAPLSLVVLATLAVGYTLWATQAVILPVLLAVFFAL
VGNPILRALGHIRIPRAIGALLLLCLGISGTVVLSVELAGPASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESLARA
ADGETERQSQIVRTRLYNPYTVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIALLPNHHQQRFTASILRNLEHEISR
YVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVVALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLH
TLEGQLITPIILGHRMAISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMVMSRIEDLQRWSRLLE
>Mature_387_residues
MLGRTQSPIIPLSDSVHPMTDQPTHNNCTNDAIKRRRSPLTARPQAPLSLVVLATLAVGYTLWATQAVILPVLLAVFFAL
VGNPILRALGHIRIPRAIGALLLLCLGISGTVVLSVELAGPASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESLARA
ADGETERQSQIVRTRLYNPYTVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIALLPNHHQQRFTASILRNLEHEISR
YVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVVALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLH
TLEGQLITPIILGHRMAISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMVMSRIEDLQRWSRLLE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=332, Percent_Identity=24.3975903614458, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787885, Length=328, Percent_Identity=22.5609756097561, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788838, Length=183, Percent_Identity=24.0437158469945, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42757; Mature: 42757

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRTQSPIIPLSDSVHPMTDQPTHNNCTNDAIKRRRSPLTARPQAPLSLVVLATLAVGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGISGTVVLSVELAG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECC
PASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESLARAADGETERQSQIVRTRLYNPY
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
TVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIALLPNHHQQRFTASILRNLEHEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVVALLNFAPYVGPLIGVLLMLLIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMAISPLMLIVALLLFGSLWGLIGLL
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVPMLVCIKMVMSRIEDLQRWSRLLE
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGRTQSPIIPLSDSVHPMTDQPTHNNCTNDAIKRRRSPLTARPQAPLSLVVLATLAVGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGISGTVVLSVELAG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECC
PASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESLARAADGETERQSQIVRTRLYNPY
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
TVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIALLPNHHQQRFTASILRNLEHEISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVVALLNFAPYVGPLIGVLLMLLIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMAISPLMLIVALLLFGSLWGLIGLL
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVPMLVCIKMVMSRIEDLQRWSRLLE
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]