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The map label for this gene is 27366440

Identifier: 27366440

GI number: 27366440

Start: 3259312

End: 3259770

Strand: Reverse

Name: 27366440

Synonym: VV1_3180

Alternate gene names: NA

Gene position: 3259770-3259312 (Counterclockwise)

Preceding gene: 27366443

Following gene: 27366439

Centisome position: 99.33

GC content: 45.75

Gene sequence:

>459_bases
ATGCCTAAACCACGTTACAAAACAAACAACTGGAAGCAATACAATCAAGCTCTCATCAACCGCGGCACTCTGACGTTTTG
GATTGATGAAGAAGCGATAAGAGAGTGGAGACAAGGCAAGCAAAACAAGCGCGGGAGACCTCGTATTTTCAGTGATTTGG
CCATCACAACCGCTTTGATGGTAAAGCGCATTTTTTCAATGCCACTTCACGCTTCGCAAGGGTTTATGGATTCCGTGTTT
CGACTTGCTCAACTTGCACTGCACTGCCCACACTACAGTTGTATCAGTCGTCGAGCCAAAGATGTTGATGTAAGTTTTAA
AACGAAAACCAAAGGACCGATTCAGCATCTTGCTATCGATGCGACAGGTCTCAAGTTTATGGCGAGGGCGAGTGGAAAGT
CAAAAAACATGGCTCGGATGGTAAACGAAGAGTGTGGCGGAAATTACATCTCGCAGTAG

Upstream 100 bases:

>100_bases
TTGAGCTTTCCAAGCCATCGAGGCTTTGTTGCGGAAATCGATGGAACTAAATTCAAAGCTTACGATCTGATCGGCTACGT
TCATTCAACTCTTTAGTCTC

Downstream 100 bases:

>100_bases
ATACGAGTACGCACGAAATCATTGCCGCAGAGTTGAGTTTATCAACGGTGAGTGATGCAGAAGTGCTGCCCAATTTGCTT
AAGCAAACACGTCGAAAAAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPKPRYKTNNWKQYNQALINRGTLTFWIDEEAIREWRQGKQNKRGRPRIFSDLAITTALMVKRIFSMPLHASQGFMDSVF
RLAQLALHCPHYSCISRRAKDVDVSFKTKTKGPIQHLAIDATGLKFMARASGKSKNMARMVNEECGGNYISQ

Sequences:

>Translated_152_residues
MPKPRYKTNNWKQYNQALINRGTLTFWIDEEAIREWRQGKQNKRGRPRIFSDLAITTALMVKRIFSMPLHASQGFMDSVF
RLAQLALHCPHYSCISRRAKDVDVSFKTKTKGPIQHLAIDATGLKFMARASGKSKNMARMVNEECGGNYISQ
>Mature_151_residues
PKPRYKTNNWKQYNQALINRGTLTFWIDEEAIREWRQGKQNKRGRPRIFSDLAITTALMVKRIFSMPLHASQGFMDSVFR
LAQLALHCPHYSCISRRAKDVDVSFKTKTKGPIQHLAIDATGLKFMARASGKSKNMARMVNEECGGNYISQ

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 17466; Mature: 17334

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPRYKTNNWKQYNQALINRGTLTFWIDEEAIREWRQGKQNKRGRPRIFSDLAITTALM
CCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKRIFSMPLHASQGFMDSVFRLAQLALHCPHYSCISRRAKDVDVSFKTKTKGPIQHLAID
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHEEC
ATGLKFMARASGKSKNMARMVNEECGGNYISQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKPRYKTNNWKQYNQALINRGTLTFWIDEEAIREWRQGKQNKRGRPRIFSDLAITTALM
CCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKRIFSMPLHASQGFMDSVFRLAQLALHCPHYSCISRRAKDVDVSFKTKTKGPIQHLAID
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHEEC
ATGLKFMARASGKSKNMARMVNEECGGNYISQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]