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The map label for this gene is nrfG [H]

Identifier: 27366306

GI number: 27366306

Start: 3102678

End: 3103319

Strand: Reverse

Name: nrfG [H]

Synonym: VV1_3037

Alternate gene names: 27366306

Gene position: 3103319-3102678 (Counterclockwise)

Preceding gene: 326424122

Following gene: 27366305

Centisome position: 94.56

GC content: 44.86

Gene sequence:

>642_bases
ATGGATAGCTGGTTAATTATCGCGACAATTATGATGCTGTTTTTTCTGATCAGTATCTGGATGGCGGCCGCGAAATGGGC
AGCGAAACAATGGTATTTACTTAGCTTATTAACGATGATCGGCGCTGTAATTACCTATGGTGTACTGCAGAGCCCCCGCC
CCGAAACAAAGCCAGAAAATGCGATGTTCAGGAGCATGACGGCAGAGGATTTGATGGCGCAATTGCAAGTTCAATTAAAA
GAGAATCCGAATGATGCGGGGTTGTGGTTTCAACTTGGGCAAGGGTATCTGCTCAATAAAGAGTTGGATGCTGCTTTGAT
CTGTTTCGACTATGCAATACAGCTGACCGAGCACCCTTCCTCTACTCAACTTGCGGCAAAAGCAACCGCATTGTACTACC
TTGGATCTCAGCAAATGAGTGGTGAGGTAAGCCTTTTGCTTGAGCAAGCCTTACAACTTGAACCTTACAATGAAGCCGCC
TTATCGCTGCTCGCGAATGATCATTTTATCTCTTTTCGTTTTCAGCAAGCGATTGATACGTGGACCTATTTGCTGGATTC
TAATGATCCTAAATTGGACAGAGAAGCTGTTATCCGCTCCATTCATCAAGCCAAGGCATTGATGCAAACTTCAACTCGTT
AA

Upstream 100 bases:

>100_bases
GGCTTTTTTTTATTTTTGTCGATAGGAAGTTGGCAATGGGTCAAAGCAGTTGCTTAAAAAGTTTGCTAAGCTAGCCGCTC
ATTTTCTAAAGGATAATCAT

Downstream 100 bases:

>100_bases
GCGTATTGTGGCTAAGCAATACATTAATTAGCGTTGTTCAAGTAAATGTTGCCAAACATGGGATGCGTTTCGGTATTTTT
GAAACTGAGTGCTGCCATAT

Product: cytochrome c-type heme lyase subunit NrfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDSWLIIATIMMLFFLISIWMAAAKWAAKQWYLLSLLTMIGAVITYGVLQSPRPETKPENAMFRSMTAEDLMAQLQVQLK
ENPNDAGLWFQLGQGYLLNKELDAALICFDYAIQLTEHPSSTQLAAKATALYYLGSQQMSGEVSLLLEQALQLEPYNEAA
LSLLANDHFISFRFQQAIDTWTYLLDSNDPKLDREAVIRSIHQAKALMQTSTR

Sequences:

>Translated_213_residues
MDSWLIIATIMMLFFLISIWMAAAKWAAKQWYLLSLLTMIGAVITYGVLQSPRPETKPENAMFRSMTAEDLMAQLQVQLK
ENPNDAGLWFQLGQGYLLNKELDAALICFDYAIQLTEHPSSTQLAAKATALYYLGSQQMSGEVSLLLEQALQLEPYNEAA
LSLLANDHFISFRFQQAIDTWTYLLDSNDPKLDREAVIRSIHQAKALMQTSTR
>Mature_213_residues
MDSWLIIATIMMLFFLISIWMAAAKWAAKQWYLLSLLTMIGAVITYGVLQSPRPETKPENAMFRSMTAEDLMAQLQVQLK
ENPNDAGLWFQLGQGYLLNKELDAALICFDYAIQLTEHPSSTQLAAKATALYYLGSQQMSGEVSLLLEQALQLEPYNEAA
LSLLANDHFISFRFQQAIDTWTYLLDSNDPKLDREAVIRSIHQAKALMQTSTR

Specific function: Required for formate-dependent nitrite reduction. Not required for the biosynthesis of any of the c-type cytochromes nor for the secretion of the periplasmic cytochromes [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790513, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24103; Mature: 24103

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50005 TPR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSWLIIATIMMLFFLISIWMAAAKWAAKQWYLLSLLTMIGAVITYGVLQSPRPETKPEN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AMFRSMTAEDLMAQLQVQLKENPNDAGLWFQLGQGYLLNKELDAALICFDYAIQLTEHPS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCC
STQLAAKATALYYLGSQQMSGEVSLLLEQALQLEPYNEAALSLLANDHFISFRFQQAIDT
CHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEHHHHHHHHH
WTYLLDSNDPKLDREAVIRSIHQAKALMQTSTR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSWLIIATIMMLFFLISIWMAAAKWAAKQWYLLSLLTMIGAVITYGVLQSPRPETKPEN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AMFRSMTAEDLMAQLQVQLKENPNDAGLWFQLGQGYLLNKELDAALICFDYAIQLTEHPS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCC
STQLAAKATALYYLGSQQMSGEVSLLLEQALQLEPYNEAALSLLANDHFISFRFQQAIDT
CHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEHHHHHHHHH
WTYLLDSNDPKLDREAVIRSIHQAKALMQTSTR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]