Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

Click here to switch to the map view.

The map label for this gene is 27366202

Identifier: 27366202

GI number: 27366202

Start: 2991692

End: 2991961

Strand: Reverse

Name: 27366202

Synonym: VV1_2925

Alternate gene names: NA

Gene position: 2991961-2991692 (Counterclockwise)

Preceding gene: 326424099

Following gene: 27366201

Centisome position: 91.17

GC content: 42.22

Gene sequence:

>270_bases
ATGACTGACGAAATGCAATTTATGCAAGAGGCGGATCTTATCGAGATCATTGAAAATCAACTTGAAGATGGAAATCCAAT
CAAGGTCAAAGAAACGTTGATGCGCCTAATGATGACAGGCACGCCTCGTGAAGATGCGGTGGCGATGATGGCGTGTGCAA
TGTCAATTGAGATTTTCGACGTGATGAAAAATGACGGCGAGTTCAATTTAAAACGTTACAGCGAAAACTTGGATTGCCTG
CCAGATTTAAGCTTTATGGAAGGTGAATAG

Upstream 100 bases:

>100_bases
TCGCTGCTTTTTTCAGCAAAAGGACAAGCGAAAAGAAATTCCGCGCGAGCTCTGAGTGGGAATGTGGCATAGTTGGAAAA
AATCCTAATGAGTAAACATC

Downstream 100 bases:

>100_bases
CGCCTCGCAAAATAAAAAGTACGTAGCAAACGTTTGCTATAATTGCCTTTATTGCCGCCTATGGGAGTGCGAGTTAGAAT
CCGCACTTCTTTTAACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCL
PDLSFMEGE

Sequences:

>Translated_89_residues
MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCL
PDLSFMEGE
>Mature_88_residues
TDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCLP
DLSFMEGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10248; Mature: 10117

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
12.4 %Met     (Translated Protein)
14.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
11.4 %Met     (Mature Protein)
13.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFD
CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VMKNDGEFNLKRYSENLDCLPDLSFMEGE
HHHCCCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFD
CCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VMKNDGEFNLKRYSENLDCLPDLSFMEGE
HHHCCCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA