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The map label for this gene is 27366169

Identifier: 27366169

GI number: 27366169

Start: 2957190

End: 2958929

Strand: Reverse

Name: 27366169

Synonym: VV1_2890

Alternate gene names: NA

Gene position: 2958929-2957190 (Counterclockwise)

Preceding gene: 27366171

Following gene: 27366167

Centisome position: 90.16

GC content: 48.05

Gene sequence:

>1740_bases
ATGAAAAGCCCTTATACCTTAGGCAATCACATCCCTTTCGAGGTGAATGATGATGAACTGGAAGTGACGATAAATAACAA
TGAAGTTCACTTCTGCTATCACGGTATGCACAACCGTACCATCGATGATCGATTTGAACTTTTTCGTACTCCTTTCAATT
TTGAAGCTCAGGCTCAGCTCTTGGGGGACGGGTTTCAAATGTTGGCGCAGACCACAGGCACTCGAGACCAAGTGATCGAC
ATCGGTCGTTGTCCTGACAATAACCCACAATATCGCCTTTATTCACAGCATGCGCCTAAGCGTTACTACAATTACTTAGT
GATTGAGGAATCACAGGGTTACACCTTGTTTGGTTTTACCTCATGCCGGCGCTTCGCTGGCTATTTTGAGCTGGAACAGG
CGGGTAACCACTGGCATGTTGTCGCTTATCTTGATGGCGAACAGACGGAAATCCAAGATTGGGAAACCAATACGCTGGAA
TCTGTGGTGCTGTTGGAAGGAGAGTCTTTGTCTGAGCTCTATGCTGAGTTTGCGCAACATATTGCGGTTCATCATCCGAT
CAGAGCAGGGGTGGAGCAGAATTCGCCAGTAGGTTGGTGTTCTTGGTATGCCTATTATGCCGATGTGAGCCAGCAAAATA
TCTTAGCGAATGTCGAGCAGATGCAGGGCAGCTTAGAGGCGCTGGAGTGGGTCTTACTTGATGATGGCTATCAGGCCTTT
ATGGGCGATTGGCTTACTCCTTCTGACAAGTTTTCAGGGGGAGTCAAACAACTGATTGCACAAATTCGAGCGAGTGGCAA
AAAACCAGCGATTTGGCTGGCGCCCTTTATTGCTCAGCCTGAATCAGAGATCTTTCGTAAGCATCCCGAATGGTTTGTTA
AACATCAGGATGGCTCACTGCTAAAAGCAGAGGACATCACTTATGGCGGTTGGCGCTGTACACCTTGGTATATCCTTGAT
ACATCACATCCTGAAGTGCAGGAGCATCTAACTCATGTGGTAAAAACCATGCGAGAAGAGTGGGGCGTAGAGCTCTTTAA
ATTGGACGCTAACTATTGGGGAACGCTAAAAGGGCAGCGTTACCAAAAAGGCATAACAGGTGTTGAAGCGTATCGACTCG
GAATGGAAGCCATTGCTCAAGGAGCGGGCGAAGCGTGGCTACTTGGTTGTAACGCACCTATGTGGCCCTCTTTAGGATTG
GTTGATGCCATGCGCGTTTCGGATGACGTTGAGCGCCACGCACATCGCTTCGAACAAATTGCCAAAGAGACCTTCTACCG
CAGTTGGCAGCATCGAAAACTTTGGCAGATTGATCCTGACTGCGCAACGTTCACTTCGCTACCTAACCAAGGTGCGCAAA
GGCAAGAATATGAATTTCACCGCAATGTCCTACTTGCGTGTGGCGGGCTGCTGCTGTCGGGCGATCCACTTCCAGAGATC
ACGCCATTCGCCAAATCTTGTCTTGCCAAATTGATGGTTCGTCAAAAGCACAATCAGAATGCGGCGAAATTTACCGCGTT
CAGTCTCAACCACGCCTTCTTGAAGCTAACCGAGAAAAACGATCTGCACTGTTTGTTCAATTATGACGGCCAGCAAGACA
AAGAGTTTACGTTGATCTCTGATACGCCAGTGCATTGGTACGACTACTGGACACAAGAACGCTTAAGTGATGAGCCTTGC
CAGTTGTTTGTGACCCAATTAAATCCAGGCTTGAATGCCAAAGCCATCGTCACAGCGTAA

Upstream 100 bases:

>100_bases
AGGCAATTTGAAAATCTTTGCCAGCAAATCGTGATGAAGATAACGATTTGTAGTGCTGCTATTGACTGATAATACAAGAA
AAACACAGTGAGCAGATTTC

Downstream 100 bases:

>100_bases
GCGCGCTTAGTCGTAAGCATATCCAGACAAGAGCCTCACGTTATAGAGGCTCTTTTCCGTTGAGATGATGGGGTGTTTGA
CGGTTGTTTGCTTTGTACAA

Product: alpha-1,6-galactosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Clan GH-D; Alpha-1 6-Galactosidase; Alpha-Galactosidase-Like Protein; Glycoside Hydrolase Family; Melibiase Family/PKD Domain Protein; Alpha-Glucosidase; Glycoside Hydrolase/PKD; Alpha-Galactosidase SCF; Alpha-Galactosidase C; Glycoside Hydrolase; Secreted Protein

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKSPYTLGNHIPFEVNDDELEVTINNNEVHFCYHGMHNRTIDDRFELFRTPFNFEAQAQLLGDGFQMLAQTTGTRDQVID
IGRCPDNNPQYRLYSQHAPKRYYNYLVIEESQGYTLFGFTSCRRFAGYFELEQAGNHWHVVAYLDGEQTEIQDWETNTLE
SVVLLEGESLSELYAEFAQHIAVHHPIRAGVEQNSPVGWCSWYAYYADVSQQNILANVEQMQGSLEALEWVLLDDGYQAF
MGDWLTPSDKFSGGVKQLIAQIRASGKKPAIWLAPFIAQPESEIFRKHPEWFVKHQDGSLLKAEDITYGGWRCTPWYILD
TSHPEVQEHLTHVVKTMREEWGVELFKLDANYWGTLKGQRYQKGITGVEAYRLGMEAIAQGAGEAWLLGCNAPMWPSLGL
VDAMRVSDDVERHAHRFEQIAKETFYRSWQHRKLWQIDPDCATFTSLPNQGAQRQEYEFHRNVLLACGGLLLSGDPLPEI
TPFAKSCLAKLMVRQKHNQNAAKFTAFSLNHAFLKLTEKNDLHCLFNYDGQQDKEFTLISDTPVHWYDYWTQERLSDEPC
QLFVTQLNPGLNAKAIVTA

Sequences:

>Translated_579_residues
MKSPYTLGNHIPFEVNDDELEVTINNNEVHFCYHGMHNRTIDDRFELFRTPFNFEAQAQLLGDGFQMLAQTTGTRDQVID
IGRCPDNNPQYRLYSQHAPKRYYNYLVIEESQGYTLFGFTSCRRFAGYFELEQAGNHWHVVAYLDGEQTEIQDWETNTLE
SVVLLEGESLSELYAEFAQHIAVHHPIRAGVEQNSPVGWCSWYAYYADVSQQNILANVEQMQGSLEALEWVLLDDGYQAF
MGDWLTPSDKFSGGVKQLIAQIRASGKKPAIWLAPFIAQPESEIFRKHPEWFVKHQDGSLLKAEDITYGGWRCTPWYILD
TSHPEVQEHLTHVVKTMREEWGVELFKLDANYWGTLKGQRYQKGITGVEAYRLGMEAIAQGAGEAWLLGCNAPMWPSLGL
VDAMRVSDDVERHAHRFEQIAKETFYRSWQHRKLWQIDPDCATFTSLPNQGAQRQEYEFHRNVLLACGGLLLSGDPLPEI
TPFAKSCLAKLMVRQKHNQNAAKFTAFSLNHAFLKLTEKNDLHCLFNYDGQQDKEFTLISDTPVHWYDYWTQERLSDEPC
QLFVTQLNPGLNAKAIVTA
>Mature_579_residues
MKSPYTLGNHIPFEVNDDELEVTINNNEVHFCYHGMHNRTIDDRFELFRTPFNFEAQAQLLGDGFQMLAQTTGTRDQVID
IGRCPDNNPQYRLYSQHAPKRYYNYLVIEESQGYTLFGFTSCRRFAGYFELEQAGNHWHVVAYLDGEQTEIQDWETNTLE
SVVLLEGESLSELYAEFAQHIAVHHPIRAGVEQNSPVGWCSWYAYYADVSQQNILANVEQMQGSLEALEWVLLDDGYQAF
MGDWLTPSDKFSGGVKQLIAQIRASGKKPAIWLAPFIAQPESEIFRKHPEWFVKHQDGSLLKAEDITYGGWRCTPWYILD
TSHPEVQEHLTHVVKTMREEWGVELFKLDANYWGTLKGQRYQKGITGVEAYRLGMEAIAQGAGEAWLLGCNAPMWPSLGL
VDAMRVSDDVERHAHRFEQIAKETFYRSWQHRKLWQIDPDCATFTSLPNQGAQRQEYEFHRNVLLACGGLLLSGDPLPEI
TPFAKSCLAKLMVRQKHNQNAAKFTAFSLNHAFLKLTEKNDLHCLFNYDGQQDKEFTLISDTPVHWYDYWTQERLSDEPC
QLFVTQLNPGLNAKAIVTA

Specific function: Unknown

COG id: COG3345

COG function: function code G; Alpha-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66589; Mature: 66589

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPYTLGNHIPFEVNDDELEVTINNNEVHFCYHGMHNRTIDDRFELFRTPFNFEAQAQL
CCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHH
LGDGFQMLAQTTGTRDQVIDIGRCPDNNPQYRLYSQHAPKRYYNYLVIEESQGYTLFGFT
HHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEECCCCCCHHEEEEEEECCCCEEEEEHH
SCRRFAGYFELEQAGNHWHVVAYLDGEQTEIQDWETNTLESVVLLEGESLSELYAEFAQH
HHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
IAVHHPIRAGVEQNSPVGWCSWYAYYADVSQQNILANVEQMQGSLEALEWVLLDDGYQAF
HHHHCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHEEEEEECCCHHHH
MGDWLTPSDKFSGGVKQLIAQIRASGKKPAIWLAPFIAQPESEIFRKHPEWFVKHQDGSL
HCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHCCCCEEEEECCCCE
LKAEDITYGGWRCTPWYILDTSHPEVQEHLTHVVKTMREEWGVELFKLDANYWGTLKGQR
EEECCCEECCEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCH
YQKGITGVEAYRLGMEAIAQGAGEAWLLGCNAPMWPSLGLVDAMRVSDDVERHAHRFEQI
HHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKETFYRSWQHRKLWQIDPDCATFTSLPNQGAQRQEYEFHRNVLLACGGLLLSGDPLPEI
HHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCC
TPFAKSCLAKLMVRQKHNQNAAKFTAFSLNHAFLKLTEKNDLHCLFNYDGQQDKEFTLIS
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEEEECCCCEEEEECCCCCCCCEEEEEE
DTPVHWYDYWTQERLSDEPCQLFVTQLNPGLNAKAIVTA
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MKSPYTLGNHIPFEVNDDELEVTINNNEVHFCYHGMHNRTIDDRFELFRTPFNFEAQAQL
CCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHH
LGDGFQMLAQTTGTRDQVIDIGRCPDNNPQYRLYSQHAPKRYYNYLVIEESQGYTLFGFT
HHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEECCCCCCHHEEEEEEECCCCEEEEEHH
SCRRFAGYFELEQAGNHWHVVAYLDGEQTEIQDWETNTLESVVLLEGESLSELYAEFAQH
HHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
IAVHHPIRAGVEQNSPVGWCSWYAYYADVSQQNILANVEQMQGSLEALEWVLLDDGYQAF
HHHHCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHEEEEEECCCHHHH
MGDWLTPSDKFSGGVKQLIAQIRASGKKPAIWLAPFIAQPESEIFRKHPEWFVKHQDGSL
HCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHCCCCEEEEECCCCE
LKAEDITYGGWRCTPWYILDTSHPEVQEHLTHVVKTMREEWGVELFKLDANYWGTLKGQR
EEECCCEECCEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCH
YQKGITGVEAYRLGMEAIAQGAGEAWLLGCNAPMWPSLGLVDAMRVSDDVERHAHRFEQI
HHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKETFYRSWQHRKLWQIDPDCATFTSLPNQGAQRQEYEFHRNVLLACGGLLLSGDPLPEI
HHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCC
TPFAKSCLAKLMVRQKHNQNAAKFTAFSLNHAFLKLTEKNDLHCLFNYDGQQDKEFTLIS
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEEEECCCCEEEEECCCCCCCCEEEEEE
DTPVHWYDYWTQERLSDEPCQLFVTQLNPGLNAKAIVTA
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA