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The map label for this gene is pspC [H]

Identifier: 27366156

GI number: 27366156

Start: 2945364

End: 2945753

Strand: Reverse

Name: pspC [H]

Synonym: VV1_2877

Alternate gene names: 27366156

Gene position: 2945753-2945364 (Counterclockwise)

Preceding gene: 27366157

Following gene: 27366155

Centisome position: 89.76

GC content: 44.87

Gene sequence:

>390_bases
ATGAATAGTCGAGAGCTCTACCGTGACCCAGTCAACGGCAAATTGAGTGGTGTCTGCGCGGGTATTGCAAACTACTTGGC
CATTGAAGTTTGGTTGATTCGAATCCTAGTGATTTCTGCAGCGCTGTTAGGCGGAAGTTTTCTGGTTATTCTGGCGTACG
TTGCCCTGACATTTATGTTGGAAAAGCAACCAATCCAGTACCAAGAGGATTTAAAAATGCGTCATGACCATAAGCTCAAA
GCCAAACCTTGGCAGCAAGGGCAAACGGCGGAATCCTTGTTGGCGATCCTTGAAGCGGATTTCAATCGAATTGAAAACAA
AGTGCGTGATATGGAAGCGTATGTCACTTCCGATACCTTCAAAGTGAACCGCGAATTTAACAAACTTTAA

Upstream 100 bases:

>100_bases
AAGTTGGAGTCTTTGTCCGGTCAAGCGGAAAAGCTTCAATCACGCATAGACACCTTGGAACGTATCCTCGATGCGGAAAA
CCCCAATTGGAGACGTCGCT

Downstream 100 bases:

>100_bases
GTTTGTTTTAGTAAAAATAATCCTTCTTGGGCAATTTTCATGAGAGCAAGGTTTAACCTTGCTCTCATTTTATTAAATTT
CAGATATTTACAAAGCTGTT

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQEDLKMRHDHKLK
AKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL

Sequences:

>Translated_129_residues
MNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQEDLKMRHDHKLK
AKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL
>Mature_129_residues
MNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFMLEKQPIQYQEDLKMRHDHKLK
AKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTFKVNREFNKL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=129, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 14759; Mature: 14759

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFML
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKQPIQYQEDLKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTF
HCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KVNREFNKL
EECCHHCCC
>Mature Secondary Structure
MNSRELYRDPVNGKLSGVCAGIANYLAIEVWLIRILVISAALLGGSFLVILAYVALTFML
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKQPIQYQEDLKMRHDHKLKAKPWQQGQTAESLLAILEADFNRIENKVRDMEAYVTSDTF
HCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KVNREFNKL
EECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]