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The map label for this gene is fimZ [C]

Identifier: 27366033

GI number: 27366033

Start: 2807449

End: 2808084

Strand: Reverse

Name: fimZ [C]

Synonym: VV1_2744

Alternate gene names: 27366033

Gene position: 2808084-2807449 (Counterclockwise)

Preceding gene: 27366034

Following gene: 27366032

Centisome position: 85.56

GC content: 41.98

Gene sequence:

>636_bases
ATGAAGGAATCACATAAGGTATGGGTTATTTCAAAAGATCCGGAGTGGTCGACGTTAGTGGTTGCTGGATTATCACATAC
CTTTATCCATTATGAGTTTTTGGTGCAGTCGTCACTAGAGTCGCTTTGGCAATTAAGTGACAATACGCTGGTGATTTATG
ACCGCCTCACCTTAGGAAATCCTTCTCAATATTTAATTTCTCCCACTACACGCGGTGGTGCGTGGATCTTAGCCAACGCG
ACGCAGCAAGACTTGGATGGCGTGAAAGGGCTGATTTCACTTGGCTGGTTTGGCTTTTTAGAGGCAGAAAAAACGCTGGA
AAACTTACATAGAGCCATTCGAATGGTGGCGTCGGGTCAATTGTGGTTCAGTCGAGAAGCCATGTCTTATGCGCTGCGTA
ATATTGTTCGTACTCAAGCTACATCCAGTTGTTCAGTGGATGTGGTTGGCAGCAAATATGAACTGTCAGGCAAAGAGCAA
AAAGTATTTCTTTATTTGCTTCAGGGGTATTCCAATAAAGAAATATCAGAACAGTTGAATGTCAGTTTAAGCACAGTCAA
AAGTCATGTATCACATATTTTATGTAAAACAGGAAAACAAAGCCGATCGCAATTAGCGACATTAATGATTGAGTAG

Upstream 100 bases:

>100_bases
GTGAGGATAATCAAAAACAAAATCTGCTAATAAAGTAGTATGCATAAAGACGGCTTATAGTTCGATAGTACTTTATTTTC
ATTTCCAGGAAGGATTTACG

Downstream 100 bases:

>100_bases
TTCTATATACCCAAATGACTCAATTTCTAGGATTCAGAGCTTCATATTCTGATTCAGTCCAAGAAAGAGAATGCAGTGGA
ATGACGAGTTCCTGCCAAGT

Product: putative response regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Two Component Transcriptional Regulator LuxR Family

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKESHKVWVISKDPEWSTLVVAGLSHTFIHYEFLVQSSLESLWQLSDNTLVIYDRLTLGNPSQYLISPTTRGGAWILANA
TQQDLDGVKGLISLGWFGFLEAEKTLENLHRAIRMVASGQLWFSREAMSYALRNIVRTQATSSCSVDVVGSKYELSGKEQ
KVFLYLLQGYSNKEISEQLNVSLSTVKSHVSHILCKTGKQSRSQLATLMIE

Sequences:

>Translated_211_residues
MKESHKVWVISKDPEWSTLVVAGLSHTFIHYEFLVQSSLESLWQLSDNTLVIYDRLTLGNPSQYLISPTTRGGAWILANA
TQQDLDGVKGLISLGWFGFLEAEKTLENLHRAIRMVASGQLWFSREAMSYALRNIVRTQATSSCSVDVVGSKYELSGKEQ
KVFLYLLQGYSNKEISEQLNVSLSTVKSHVSHILCKTGKQSRSQLATLMIE
>Mature_211_residues
MKESHKVWVISKDPEWSTLVVAGLSHTFIHYEFLVQSSLESLWQLSDNTLVIYDRLTLGNPSQYLISPTTRGGAWILANA
TQQDLDGVKGLISLGWFGFLEAEKTLENLHRAIRMVASGQLWFSREAMSYALRNIVRTQATSSCSVDVVGSKYELSGKEQ
KVFLYLLQGYSNKEISEQLNVSLSTVKSHVSHILCKTGKQSRSQLATLMIE

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23687; Mature: 23687

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESHKVWVISKDPEWSTLVVAGLSHTFIHYEFLVQSSLESLWQLSDNTLVIYDRLTLGN
CCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
PSQYLISPTTRGGAWILANATQQDLDGVKGLISLGWFGFLEAEKTLENLHRAIRMVASGQ
CCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LWFSREAMSYALRNIVRTQATSSCSVDVVGSKYELSGKEQKVFLYLLQGYSNKEISEQLN
EEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEECCCCCCCHHHHHC
VSLSTVKSHVSHILCKTGKQSRSQLATLMIE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKESHKVWVISKDPEWSTLVVAGLSHTFIHYEFLVQSSLESLWQLSDNTLVIYDRLTLGN
CCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
PSQYLISPTTRGGAWILANATQQDLDGVKGLISLGWFGFLEAEKTLENLHRAIRMVASGQ
CCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LWFSREAMSYALRNIVRTQATSSCSVDVVGSKYELSGKEQKVFLYLLQGYSNKEISEQLN
EEEHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEECCCCCCCHHHHHC
VSLSTVKSHVSHILCKTGKQSRSQLATLMIE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA