| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27366029
Identifier: 27366029
GI number: 27366029
Start: 2802622
End: 2803509
Strand: Reverse
Name: 27366029
Synonym: VV1_2740
Alternate gene names: NA
Gene position: 2803509-2802622 (Counterclockwise)
Preceding gene: 326424064
Following gene: 326424062
Centisome position: 85.42
GC content: 48.09
Gene sequence:
>888_bases ATGGGTAACTCTCTCACTCGGCGCATCACACGGGTGTTGTTTGGCACTCTGATCTGTTTTGTTTCCCAGCCTCTGGCAGC GGCAGAGCCTGCAACGCAAGCCTGCCAAGGCGAATTTGTTGTGCAGTTGTCCAGTCATCCGGTGGACAACGCTAGCAGTT CCGATAATGTCTTGTGGTTCCAAGGCTATGTTGAGTTGGAAGGGGCGCTGCTCGCTTGCTCTCCTCAATTGGTGATTCAC GCCAAAAACGGTTGGAAGGAGCCGATTGTTGGGCCTCAAGGCGCAGTGGCGTCTAACCTATTGGATGGGCAAAGAAAAAG CCTGCAGCGTGATCAGCAAGGCAATTTTATTTTGCCACTCCAAGGGCGAAAGAGAAGTGAGTTTTGGGTACATATTCCTC AAGGAAAAGTGCTACTTTCTGGGCTATATCAAAGTGATTTTGAGTTTAAAGTTAAGGCGGCTAATAACGAATTTGGTCGA GCCGTGTCTCTCAATTACCAAGTTAAACCTTTTGTAAGGGCGCGAGTGGAAAGCCGTCAGGGGGCACATGTCTCGGTGTC TGGCACCAACGTCAGTATTGATATGGGCAACTTAACCGAGAAGAATCAACGCCAACTCGATGTGATTGTGGTGAGCAATG GCAGTGTCAAATTGGAACTGGATTCGCGAAACCAAGGTGACATGGTCAACGTTAAAAATGCACGCTATAAAATTCCGTAT GCCACTTCTCTTAATGGTCAGCCGCTAAGATTAAATGTATCACATTACTTGCGTCCTCATCAGCAGCGTGAAACACGCTT TCGCTTACAGTTCGAAAATACGCCTATGCCATCGGCAAGAGAAGGGCGCTATGAAGATGAAATGACCATCATGCTGACGG CTTTTTGA
Upstream 100 bases:
>100_bases GATTGTGATCCCTGAGTCAGACAACAGCTTGATCAATCTTGGTCAGATTAACGTGGTGCTGATGGACAAATCAGCACATT AAATTGGTAAGGAGGAGAAG
Downstream 100 bases:
>100_bases GTCGTCATGTTTGTGGCCGAACGCGAACAAAAAAACCGCCTCAGTTGAGGCGGCATAACGTAGTGCAATATGGAGATGGT TATTGTTATTTGGTTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGNSLTRRITRVLFGTLICFVSQPLAAAEPATQACQGEFVVQLSSHPVDNASSSDNVLWFQGYVELEGALLACSPQLVIH AKNGWKEPIVGPQGAVASNLLDGQRKSLQRDQQGNFILPLQGRKRSEFWVHIPQGKVLLSGLYQSDFEFKVKAANNEFGR AVSLNYQVKPFVRARVESRQGAHVSVSGTNVSIDMGNLTEKNQRQLDVIVVSNGSVKLELDSRNQGDMVNVKNARYKIPY ATSLNGQPLRLNVSHYLRPHQQRETRFRLQFENTPMPSAREGRYEDEMTIMLTAF
Sequences:
>Translated_295_residues MGNSLTRRITRVLFGTLICFVSQPLAAAEPATQACQGEFVVQLSSHPVDNASSSDNVLWFQGYVELEGALLACSPQLVIH AKNGWKEPIVGPQGAVASNLLDGQRKSLQRDQQGNFILPLQGRKRSEFWVHIPQGKVLLSGLYQSDFEFKVKAANNEFGR AVSLNYQVKPFVRARVESRQGAHVSVSGTNVSIDMGNLTEKNQRQLDVIVVSNGSVKLELDSRNQGDMVNVKNARYKIPY ATSLNGQPLRLNVSHYLRPHQQRETRFRLQFENTPMPSAREGRYEDEMTIMLTAF >Mature_294_residues GNSLTRRITRVLFGTLICFVSQPLAAAEPATQACQGEFVVQLSSHPVDNASSSDNVLWFQGYVELEGALLACSPQLVIHA KNGWKEPIVGPQGAVASNLLDGQRKSLQRDQQGNFILPLQGRKRSEFWVHIPQGKVLLSGLYQSDFEFKVKAANNEFGRA VSLNYQVKPFVRARVESRQGAHVSVSGTNVSIDMGNLTEKNQRQLDVIVVSNGSVKLELDSRNQGDMVNVKNARYKIPYA TSLNGQPLRLNVSHYLRPHQQRETRFRLQFENTPMPSAREGRYEDEMTIMLTAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32973; Mature: 32842
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSLTRRITRVLFGTLICFVSQPLAAAEPATQACQGEFVVQLSSHPVDNASSSDNVLWF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCEEEE QGYVELEGALLACSPQLVIHAKNGWKEPIVGPQGAVASNLLDGQRKSLQRDQQGNFILPL EEEEEECCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCEEEEE QGRKRSEFWVHIPQGKVLLSGLYQSDFEFKVKAANNEFGRAVSLNYQVKPFVRARVESRQ CCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECHHHHHHHHCCC GAHVSVSGTNVSIDMGNLTEKNQRQLDVIVVSNGSVKLELDSRNQGDMVNVKNARYKIPY CCEEEEECCEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCEEEECCCEEECCE ATSLNGQPLRLNVSHYLRPHQQRETRFRLQFENTPMPSAREGRYEDEMTIMLTAF EECCCCCEEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure GNSLTRRITRVLFGTLICFVSQPLAAAEPATQACQGEFVVQLSSHPVDNASSSDNVLWF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCEEEE QGYVELEGALLACSPQLVIHAKNGWKEPIVGPQGAVASNLLDGQRKSLQRDQQGNFILPL EEEEEECCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCEEEEE QGRKRSEFWVHIPQGKVLLSGLYQSDFEFKVKAANNEFGRAVSLNYQVKPFVRARVESRQ CCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECHHHHHHHHCCC GAHVSVSGTNVSIDMGNLTEKNQRQLDVIVVSNGSVKLELDSRNQGDMVNVKNARYKIPY CCEEEEECCEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCEEEECCCEEECCE ATSLNGQPLRLNVSHYLRPHQQRETRFRLQFENTPMPSAREGRYEDEMTIMLTAF EECCCCCEEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA