| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365917
Identifier: 27365917
GI number: 27365917
Start: 2661324
End: 2662541
Strand: Reverse
Name: 27365917
Synonym: VV1_2624
Alternate gene names: NA
Gene position: 2662541-2661324 (Counterclockwise)
Preceding gene: 27365918
Following gene: 27365914
Centisome position: 81.13
GC content: 41.54
Gene sequence:
>1218_bases TTGCTACTCGCCAACAGACGGTATACACAAGAAGCGATTGAAACAGCGGAACAAGTGGCAAATGAGGTTAATGTTAGACA TGCCAAGTGGTTAGTGAGTATGAAATACATTCTCGATCAGTCTAACGTTGATAACCTACTTAGTTTACAAGGTCGCTATT GCGAAGACGTTATTTTTTCTGAAGATGAGCGTATCACTCGCAATCAACGCATTTTATTAGAATGTGAGCAGGCAAAAGTG GTTGAGCGGCGTGAACAGGTAAAAGCAAGACAAAATACCCATAAACGTGTCGTTGTGGATGTTACCCGCCATGCTGAGCA CATGATGATTGAGAAACTACTCAATACGCCTATAGATAAATTGTTCAATGGTATACCCAACTTTGATCATCTTGCTTCGT TTGCTTACTCACCATCCTTGAGTTTCTCCAAGTTGAGTACTTTGACAACCTTGAGTCATCAGCTTAGTTCAAGCGTTTTA GATCTCGTTACAAACCCCAAATTCTGCGAACGCATAGGGAAATCATCAAAAAGTGCGACTGATGCGAAAATAGCAATAGG GCAGATGGGCATAGAAAATTGCCGTTTACTTTTCCCTGTTCTGATGGCTAGGCCGATGCTCAAATGGTCCGATGCGAATA CCAAGTTGATTGCTCCTAAAATGTGGCAACACATGATAGTCACCGCGAATGTCACTAGAATGCGCTTACAAGATGCAAAT TTCAAAGAGCCCGATGCAGGCATCTTGATTGGTGTGTTGAGAACGGTTGGTCAGTTTCTCGCATCAAACCATTTTACACA TACATTTGAAGATGCTTTAGTTGAGATGATGCTCAAATACCGTGAGCAAGATATGCGTGAAGAGTATTACGCTTGTGCAG AGGTCGTCGCCAATATGTCTTTTTTACCCAAAATTATTTTCGAACTTGAGGGACAACTAGCCAAACGAGTCTTGGAGTCC ATGGATTGGCCAGCAAATGCAATGTTTATCAAAAATGCTGTGATTGAAGATATAGACAATGTGCCTGTTGAAGAAAGAAG TATTGCAGGAGCTGCATTAGCACAAAGTCGGGCATTCTCAATCTATGATGGATTACAGCACAGCAATGCATTCGTAGAAA AACACAAACCATATTGGTTTGCTCAAGTACAAATGCCAGGAACATCGCTTAAAGATATTCAAGCAAGAATGCCCGGACGC TTAACATTGTCTATGTGA
Upstream 100 bases:
>100_bases TTCAAGATTAAATAATGGAAGCAATATCACTTTGGTTTCTCATTTTTGGTCTCTATGGAATAAACTAAAACTAGTGATAA ATCTTTAAAGGGATACAGAT
Downstream 100 bases:
>100_bases TTTGTACGCAATTTCAATGGTTTGCGGTGGCTTGGCTATGTGGATTGGTAGCCCTACGGAAGCGTTAGCTAAGTGCGCAT TATGTATATTATGTTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSVL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQSRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM
Sequences:
>Translated_405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSVL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQSRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM >Mature_405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSVL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQSRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46229; Mature: 46229
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFS CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHC EDERITRNQRILLECEQAKVVERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDK CCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHH LFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSVLDLVTNPKFCERIGKSSKSAT HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN CHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEECHHHHHHEEEECCHHHEEECCCC FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKIIFELEGQLAKRVLESMDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQSRAFS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHH IYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGRLTLSM HHHHHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCEEECC >Mature Secondary Structure MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFS CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHC EDERITRNQRILLECEQAKVVERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDK CCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHH LFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSVLDLVTNPKFCERIGKSSKSAT HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN CHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEECHHHHHHEEEECCHHHEEECCCC FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKIIFELEGQLAKRVLESMDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQSRAFS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHH IYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGRLTLSM HHHHHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA