| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365648
Identifier: 27365648
GI number: 27365648
Start: 2353903
End: 2356806
Strand: Reverse
Name: 27365648
Synonym: VV1_2327
Alternate gene names: NA
Gene position: 2356806-2353903 (Counterclockwise)
Preceding gene: 27365661
Following gene: 27365647
Centisome position: 71.81
GC content: 50.62
Gene sequence:
>2904_bases ATGCGCTTATTTGCCAAGAGTTTGGTTGCCTCAACCATTGCGGGTCTATTGACCGCGTGTGGTGGTGGCGACGGTGGCGG CTCTGCGACCAGTCCAGCAACCCCTTCAACCCCAACTAAAGTAACGTTAACCGGCTTTGTCACGGAGTCTCAGCCAGTGA AAGTCACGGTCGATCAAACCGTCAAAACGGAAGTGAGGCTGCTGGTGGGTGAAGAGGTCGTGGCGCGTTCAGCGATCAAA ATACACGCGGGAGAGCGTCAACCTCGCTATCTTTTAGAGGTGGATCCTGCCACTCTCAGCGAGGGCCTCCCGATGACGAT TGAGGCAGTCAGCGTGATCTCCCCACGTGAACAAGAGGCCAACGCGCGCACTGCTGAAAAAGCACAAACGGAAGATCAAG CGTCATCAGAAACTCGCGAAGTGTTGCTTTATCGCAATGCCATTGGTACCAAGTTGCCGCTACTCGCCGCAGATAAAAAC AACGATAAATTCATTACCCATGATGAATGGCTGCCACTGACTTTCTCACAAACCAACTCGTTGTTTGTTGCACTCGATCC AAGTGGCGAACAAAGTGCACTTGAACTGATGAACGAACATGGGCGAGAGAGAATCATGGCCATCGCCGCGTTGCTGCATG CGATCGCCGATCCTTTTGATCGTGAAGAACAAATCGAACTCACCTCGCTCAATCTCTCGACCGCTGCCTTTATTGATGCC CTGCTTAAGAATGAAAACATGGCCGCTGCCACAACCGAGGAAGAGACGCCTTGGTTGGATAGAGTGAGCGATACTTACCA AGCGATGGCACAAACCCATCAAGTGGCACTACCCGACGGTTGGCAGAAGCGTATTAAAGACAAATGGATCGAGATGCACG CGGTCAAGCAAAGCAATGTACTGCGCGAAGTATTAGATAACTCTTACCCAACCCGCACCTTGGTACTCCGTGGCGAAACG GTTTCAGGAATGAAGAACCCGCAGATTTCGCTACAAATGGGTTCTTATCCTAACGATCCTTTAGCAAACAGCCATTACGA CAACCCACTCAAACCCAAACGCCCATTGCTGGTACCAATTACCCCTGTGGGTGAAGAAAAATCGTCGACGGCTATTGAAG GGGCAAATCGTCAATTTGAGTTCCGCGTAACGCTTCGCGATACCGCGCAAGGCTTTGAAACTTGTCAGCCCACGGCGAAC GGCGTGTATGTTTACTACGATAAAAACGCCGATCTGACCAAGCCAAGCGCCCATCCGACCGACAATATGCAAGATTTGCT GACCGTGATTGCGTTTGATCCAGACAGCGGTGTCGAGATGCGTTCCTACTTGGGCGCCTTCTGTGAACTGGCGAGAGCTG ATATCGACAAGAACCAAGATGGCATCGTCACTGCCGAAGAGTTTCCGCGTTTAAAAGTCTCATTTGAAAACAACGCACAC GCCCTGTTGGCTGAACGCAGTGGCTTGATGCATCACGGTGGCGGCCAATACGCCAAACCCGTCAAACAGACCGCGATCGA TGAACTGTTTGCCAAGCATACGCCGGAAATGGTGCAGTTGATGAGTAGCATTGTGGCGATGCAAATGGCATCAGCAGAAA ATCAGGCACTACCGGCCATCGACAATGCCTCGGACTTTTTCCGCACCGCTGCTCAGTTGCTCGATCTCGACTACAACGCT CAATACCGTATGTACAGTAAAAGCAACATTCTGCCAGAGCCGTTTCAAGTCATCCAACTGCTGAAAAACATCGCCGATGT CGCCCATCATATGGAAGATAACGAGGCCACCATCAACACGCTGTTGACGTGGAGTGCGCAAGCTTTCACTCACCTTAGCC AATTTGCTGCGGACAACCAGATCGCTGCCGACTTAAACACGGCAATCAACGCTGGCAACAGTTGGCTACCCGCCGAGCCA GTGAATGGATTGGAGTCGATTTGCAGCACCGAATTTGCTGAAGACCAAATTCGTGGCATTGCACTTCGTGGACGTGGGGA CGATTGGCTCACATTAGAATGGCTGCCGCAAGGAACCAGTGGCTATACCGTCTACTGGGACACCAAGCCGTTTAGTCAAC TGAGTGAAGCGACCAATCAGACTAAGAGCGCAACGCACAGAGTGACATTAAATGGTTTAACGCCGTTTACTCGCTACTAT TTCCAGATCGCGCACGATGGTACGCCGAGCGCTCAGTTCAATGTTCGAGTTAGCGATGCTGGCCTAACCAATCCTCATCT CTTTGATTCGGATTTTAGCTGTGACCCAATGAGTGGTTATGCACGAAACTCCAACATCGATGGTTACCAATCGCTTTCTT TCCTAAAAGTGGATGCGCAAGGTGAACGTTTGAGTCGACAAGATCTTCCGTATGTTGCAACCCCTCACAGCTGCGCAGTT GAAACCAAAACTGGCCGAACGTGGGCCGTGCCAAATAGCGAGATGGTGGAAGGTGATCGCATTCGTCACTGGTACAGCAT CGATAACCGATATCTGCATGGTGACAACCTGGCGGTGACAGACGACCAATACAACGGATTTTGTGTCGCGACCAACGGTG AGGTTTATCGCCAAGACAAAGCACGTCACTGTACGGTAAACCAACTTGTTCAACGCGCCAACGAAGCCAAACTTTGCGGC ATCACCGATTGGAGGCTGCCGACCTACGAAGAAACGCTCAATATTATGACTTTGAAAGGCAAGCCTCAGTTGAACTTTGA TGATGATTTCTTCCCAAATATTGACGGCAACATGCTGTGGATGAAGCAAGAAAACCCTGATGTTAAAACCCTAGCAAACC TACTTTTCCCAACCAGTTGGAACGCACGAACGCAATTGGAAGGCAAAGAGGTGCCTCACCAGGTGATGCTGGTGAGCGAT GGTTTAAAAGTGAATCAGGAATAA
Upstream 100 bases:
>100_bases TATTAATTAGATCATTGATCTGATATGTAGAGTATTTATTCAAATCACGGCGTCATTTCCCTTCTCATCTATCGAGCAAA TTTTTCAATAAGGAGCGAAA
Downstream 100 bases:
>100_bases GGAAGCACATATGAAAACGACTTTTCTCATCTCATTAGCAGCGGTACTCTCAACTCCGCTCTATGCGCAATGCCTTCCTG AAGAGGGGCGTTTTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 967; Mature: 967
Protein sequence:
>967_residues MRLFAKSLVASTIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSAIK IHAGERQPRYLLEVDPATLSEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKN NDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAAFIDA LLKNENMAAATTEEETPWLDRVSDTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRGET VSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTAN GVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENNAH ALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDYNA QYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEP VNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTRYY FQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSCAV ETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCG ITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDGNMLWMKQENPDVKTLANLLFPTSWNARTQLEGKEVPHQVMLVSD GLKVNQE
Sequences:
>Translated_967_residues MRLFAKSLVASTIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSAIK IHAGERQPRYLLEVDPATLSEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKN NDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAAFIDA LLKNENMAAATTEEETPWLDRVSDTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRGET VSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTAN GVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENNAH ALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDYNA QYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEP VNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTRYY FQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSCAV ETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCG ITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDGNMLWMKQENPDVKTLANLLFPTSWNARTQLEGKEVPHQVMLVSD GLKVNQE >Mature_967_residues MRLFAKSLVASTIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSAIK IHAGERQPRYLLEVDPATLSEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKN NDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAAFIDA LLKNENMAAATTEEETPWLDRVSDTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRGET VSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTAN GVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENNAH ALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDYNA QYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEP VNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTRYY FQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSCAV ETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCG ITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDGNMLWMKQENPDVKTLANLLFPTSWNARTQLEGKEVPHQVMLVSD GLKVNQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107280; Mature: 107280
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1 ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFAKSLVASTIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCH VKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLSEGLPMTIEAVSVISPREQEA HCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCHHHHCCCCEEEEEEECCCCCHHHC NARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQTNS CCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCC LFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAAFIDA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH LLKNENMAAATTEEETPWLDRVSDTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNV HHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHH LREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPI HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE TPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAHPT CCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCCCC DNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENNAH CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCCCE ALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAI EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC DNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINT CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEH LLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIRGI EEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEE ALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTRYY EEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHEEE FQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQ EEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVT CCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEE DDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTLKG CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEECC KPQLNFDDDFFPNIDGNMLWMKQENPDVKTLANLLFPTSWNARTQLEGKEVPHQVMLVSD CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEC GLKVNQE CEECCCC >Mature Secondary Structure MRLFAKSLVASTIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQT CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCH VKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLSEGLPMTIEAVSVISPREQEA HCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCHHHHCCCCEEEEEEECCCCCHHHC NARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQTNS CCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCC LFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAAFIDA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH LLKNENMAAATTEEETPWLDRVSDTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNV HHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHH LREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPI HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE TPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAHPT CCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCCCC DNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENNAH CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCCCE ALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAI EEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC DNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINT CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEH LLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIRGI EEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEE ALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTRYY EEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHEEE FQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQ EEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVT CCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEE DDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTLKG CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEECC KPQLNFDDDFFPNIDGNMLWMKQENPDVKTLANLLFPTSWNARTQLEGKEVPHQVMLVSD CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEC GLKVNQE CEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA