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The map label for this gene is yjjU [H]

Identifier: 27365611

GI number: 27365611

Start: 2310243

End: 2311109

Strand: Reverse

Name: yjjU [H]

Synonym: VV1_2289

Alternate gene names: 27365611

Gene position: 2311109-2310243 (Counterclockwise)

Preceding gene: 326423979

Following gene: 27365610

Centisome position: 70.42

GC content: 49.48

Gene sequence:

>867_bases
ATGAAAGCACTGGTCGTGGAAGGGGGCGCAATGCGCGGCGTATTTGCCAGCGGCGTATTGGACGCATTTTTGCAGAAAAA
TTATCAACCTTTTGATCTGGCTATTGGGGTGTCGGCAGGCGCATCCAATTTGGTTGGCTATTTGGCGAACGCTCAAGGGC
GTAGTTTTAATGTCATCACTAAATTGGCCACATCTCAGCGTTTTTATAACCCAAAACGCTTTATCAAAGGGGGCGATTTG
GTGGACGTAAAATGGTTGGTTGACGAATCCATGCGTCGCTACCCCATTGAGGCAGAACGTCTCTTTACAAACACGCGTTT
GCTGGCCACCACCACTGACATAGCAACAGGGTTGCCACACTATCAACAGCTAACTAAGCAGAATGTGAATCAATTATTGG
AAGCGAGCTGCGCCTTGCCTATTGCTTATCGCCAACCACCTTGCTTTGCAGGCAGTTGTTTTACCGATGGCGGGGTCTCG
GATTCCATTCCTGTGAAAGAAGCGTATCGCCAAGGCGCTCGTGACATAACGGTGGTGTTGTCGCACCCATTGAGCTACGA
GATGCCAGAAAGTCGCCACACTTGGCTCACCAACACCTTGTTGTCACGTCAACCCGCTATCGCTAAAGCGCTGCGTCAAC
GAGCCCAAAATTACAATGCGGCATTGGCGTTTATTCGCTTCCCACCAGCCGATGCCACTATCCGAGTGATTGCGCCAGAA
GAAGGTTTTAAGGTGAAACGGTTAACGATGAATCAAAGCAAACTTCATCAAGGCTATCAAATGGGTATTACGCAGGGAAA
ACAGCATTTAGCAAGGTTGGCCGGCACTGATGGGCTGACACGCGAAAACTGCCCTTTTTGCGTTTAA

Upstream 100 bases:

>100_bases
ATAGACGCCTCCTATTTCAACGATAAACACAACCGACTACGACATCCCGCCCGGTTGTTTTAGCCTTGCAGACTAGAGTG
AATCTAAACGGTAAAGAGAG

Downstream 100 bases:

>100_bases
AACGGACATTTTTCGCGCAACGAGATCCGACCACGTAACAAAAGTGTCACCAACTTCAAATTACTCAACAATAGCTTGTT
TCAAAGATGATAATTTACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKALVVEGGAMRGVFASGVLDAFLQKNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPHYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPADATIRVIAPE
EGFKVKRLTMNQSKLHQGYQMGITQGKQHLARLAGTDGLTRENCPFCV

Sequences:

>Translated_288_residues
MKALVVEGGAMRGVFASGVLDAFLQKNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPHYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPADATIRVIAPE
EGFKVKRLTMNQSKLHQGYQMGITQGKQHLARLAGTDGLTRENCPFCV
>Mature_288_residues
MKALVVEGGAMRGVFASGVLDAFLQKNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPHYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPADATIRVIAPE
EGFKVKRLTMNQSKLHQGYQMGITQGKQHLARLAGTDGLTRENCPFCV

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=279, Percent_Identity=35.84229390681, Blast_Score=161, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31813; Mature: 31813

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVVEGGAMRGVFASGVLDAFLQKNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVIT
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHH
KLATSQRFYNPKRFIKGGDLVDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPH
HHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHCCEEEEEEHHHHHCCHH
YQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVSDSIPVKEAYRQGARDITVVL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
SHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPADATIRVIAPE
ECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECC
EGFKVKRLTMNQSKLHQGYQMGITQGKQHLARLAGTDGLTRENCPFCV
CCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKALVVEGGAMRGVFASGVLDAFLQKNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVIT
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHH
KLATSQRFYNPKRFIKGGDLVDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPH
HHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHCCEEEEEEHHHHHCCHH
YQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVSDSIPVKEAYRQGARDITVVL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
SHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPADATIRVIAPE
ECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECC
EGFKVKRLTMNQSKLHQGYQMGITQGKQHLARLAGTDGLTRENCPFCV
CCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]