Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

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The map label for this gene is 27365512

Identifier: 27365512

GI number: 27365512

Start: 2185264

End: 2186121

Strand: Reverse

Name: 27365512

Synonym: VV1_2183

Alternate gene names: NA

Gene position: 2186121-2185264 (Counterclockwise)

Preceding gene: 27365517

Following gene: 326423960

Centisome position: 66.61

GC content: 41.14

Gene sequence:

>858_bases
ATGAGCACGAACATGAGTCAAGCAGATATCAAATGGGACCAACAAGTACGATTTCGACTAATTGAGATCATTGCTCTTTG
GGAGGGTCGACTCACGACAAATCATCTATGTGATGCTTTTCACATAGGAAGACAACAAGCTTCTAGGGATATCAACAAGT
ACATTAGCTTAACTAACCAAGGTCAATTGATACTCGATAGGACAATTAAAGGCTACAGGCCAGCAGACAACTTTAAGCCT
TTGTTTACTCAAGGGACTGCTCATGAGTACTTGCTGATGCTCCATCAACAATATAACCAAGAAGAAACCTTTGAGTTCTT
TAACTGGGGGGAAGCTCAATCGACTATATTGAACGTCCCTGAAAGGACTATATCACCGAACATCGTTCGAGGATTAATTG
CGGCAGCAAGGGCTAATCTTCGCGTAGACATTGACTATGTGTCACTCTCTACCCCTGAAGTTCGAGGTAGAATTATTGCG
CCTCACAGCTTAGTCTATGATGGAATAAGGTGGCATGTAAGAGCATATTGTGAAGAAAAACATGAGTTTCGAGATTTTGT
ATTAAGTCGCTTTAGAAACGAACCTGACTTAATGGATAAGTCATCAAAGACACGAGAGCACGATGACAGTTGGAACCATC
AAGTTAAGTTAACGATTACACCTAATCCTTACTTATCTGAGCAACAGCGAGTGGTTGTTGCAGACGACTACGCTATGGAA
GATAGTAAGTTGGAAATAACAACCCGAAGAGCTTTAGTTCATTACTTCCTTCGCCGTATGGGATCGACGCAAGATGAAAA
ATTACTTAGAGCGCAACCAGAAGCTCATCAATTGACAGCATACTTTGATTACACTTAA

Upstream 100 bases:

>100_bases
GTAAAGATTCCTGACTTTTAGTGCTCCTCCCAATATCCACAATAAATATATGTACTTTATTGCTACATGTATATACTGTA
TACATCAACATGTAACATTT

Downstream 100 bases:

>100_bases
GTACAGTGAGTTGCGGCTAGTGATGCTGCAACTCATCTTTAGCTTCACGTTACTTGATCAATAAGAGCAACAAGGCCCAA
AAATCCCTCCAGTATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKP
LFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIA
PHSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME
DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT

Sequences:

>Translated_285_residues
MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKP
LFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIA
PHSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME
DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT
>Mature_284_residues
STNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKPL
FTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAP
HSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAMED
SKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33478; Mature: 33347

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC
GQLILDRTIKGYRPADNFKPLFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVP
CCEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCC
ERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAPHSLVYDGIRWHVRAYCEEK
CCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHHHHHHHHHH
HEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC
DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT
CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCC
>Mature Secondary Structure 
STNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC
GQLILDRTIKGYRPADNFKPLFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVP
CCEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCC
ERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAPHSLVYDGIRWHVRAYCEEK
CCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHHHHHHHHHH
HEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC
DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT
CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA