| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365512
Identifier: 27365512
GI number: 27365512
Start: 2185264
End: 2186121
Strand: Reverse
Name: 27365512
Synonym: VV1_2183
Alternate gene names: NA
Gene position: 2186121-2185264 (Counterclockwise)
Preceding gene: 27365517
Following gene: 326423960
Centisome position: 66.61
GC content: 41.14
Gene sequence:
>858_bases ATGAGCACGAACATGAGTCAAGCAGATATCAAATGGGACCAACAAGTACGATTTCGACTAATTGAGATCATTGCTCTTTG GGAGGGTCGACTCACGACAAATCATCTATGTGATGCTTTTCACATAGGAAGACAACAAGCTTCTAGGGATATCAACAAGT ACATTAGCTTAACTAACCAAGGTCAATTGATACTCGATAGGACAATTAAAGGCTACAGGCCAGCAGACAACTTTAAGCCT TTGTTTACTCAAGGGACTGCTCATGAGTACTTGCTGATGCTCCATCAACAATATAACCAAGAAGAAACCTTTGAGTTCTT TAACTGGGGGGAAGCTCAATCGACTATATTGAACGTCCCTGAAAGGACTATATCACCGAACATCGTTCGAGGATTAATTG CGGCAGCAAGGGCTAATCTTCGCGTAGACATTGACTATGTGTCACTCTCTACCCCTGAAGTTCGAGGTAGAATTATTGCG CCTCACAGCTTAGTCTATGATGGAATAAGGTGGCATGTAAGAGCATATTGTGAAGAAAAACATGAGTTTCGAGATTTTGT ATTAAGTCGCTTTAGAAACGAACCTGACTTAATGGATAAGTCATCAAAGACACGAGAGCACGATGACAGTTGGAACCATC AAGTTAAGTTAACGATTACACCTAATCCTTACTTATCTGAGCAACAGCGAGTGGTTGTTGCAGACGACTACGCTATGGAA GATAGTAAGTTGGAAATAACAACCCGAAGAGCTTTAGTTCATTACTTCCTTCGCCGTATGGGATCGACGCAAGATGAAAA ATTACTTAGAGCGCAACCAGAAGCTCATCAATTGACAGCATACTTTGATTACACTTAA
Upstream 100 bases:
>100_bases GTAAAGATTCCTGACTTTTAGTGCTCCTCCCAATATCCACAATAAATATATGTACTTTATTGCTACATGTATATACTGTA TACATCAACATGTAACATTT
Downstream 100 bases:
>100_bases GTACAGTGAGTTGCGGCTAGTGATGCTGCAACTCATCTTTAGCTTCACGTTACTTGATCAATAAGAGCAACAAGGCCCAA AAATCCCTCCAGTATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKP LFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIA PHSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT
Sequences:
>Translated_285_residues MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKP LFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIA PHSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT >Mature_284_residues STNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQGQLILDRTIKGYRPADNFKPL FTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVPERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAP HSLVYDGIRWHVRAYCEEKHEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAMED SKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33478; Mature: 33347
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC GQLILDRTIKGYRPADNFKPLFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVP CCEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCC ERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAPHSLVYDGIRWHVRAYCEEK CCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHHHHHHHHHH HEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCC >Mature Secondary Structure STNMSQADIKWDQQVRFRLIEIIALWEGRLTTNHLCDAFHIGRQQASRDINKYISLTNQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC GQLILDRTIKGYRPADNFKPLFTQGTAHEYLLMLHQQYNQEETFEFFNWGEAQSTILNVP CCEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCC ERTISPNIVRGLIAAARANLRVDIDYVSLSTPEVRGRIIAPHSLVYDGIRWHVRAYCEEK CCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHHHHHHHHHH HEFRDFVLSRFRNEPDLMDKSSKTREHDDSWNHQVKLTITPNPYLSEQQRVVVADDYAME HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC DSKLEITTRRALVHYFLRRMGSTQDEKLLRAQPEAHQLTAYFDYT CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA