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The map label for this gene is priC [C]

Identifier: 27365444

GI number: 27365444

Start: 2112311

End: 2112856

Strand: Reverse

Name: priC [C]

Synonym: VV1_2111

Alternate gene names: 27365444

Gene position: 2112856-2112311 (Counterclockwise)

Preceding gene: 27365445

Following gene: 27365443

Centisome position: 64.38

GC content: 45.42

Gene sequence:

>546_bases
ATGAAACTACAAGATATTGCGCAGCGGCTTGATAAGCTTGCTGTTCAGGCCGCTCAGTTAGACAGACAAAGAGGCGAACA
TCACACCCCTTTGTTTGATGAGCGATTGTTTGCTTGCCGAGCGCGCCTCTTAGTGCCCTGCGTTAAAGAGACCAAAGCCA
CTTTGGATGCGTTACTGAGAGAGCAAAAAGATCAGAGACTCACAACCCAACGTGCTGAATATCTAACAGAACAGTTGGTT
GCTCAGTTCTCTGCGATTCAACGTGAGCTCTCTACAACCACCATTCGCAAGAATGAAATCAAACATGCTAGCCATTATCG
CAAACCAATCAATGTGTTGTATCAAGAGTTGGCACAGCATCAAGAGTGGACGCGTAGACTAAAAGAAATGGTGTTGGAAA
AGCAGAAAGAACTCGATACCGCACCTGCATTTCTTCGTACGCAAGCTCAACAGGCGTTATTGGTAACAGAGCAACGATTA
GCGCGTTGCCAGGCAGCGATGCTAAAGATAGAAAATCAGATCACATACAGAGAGAAAAATCAGTAA

Upstream 100 bases:

>100_bases
CTGCGATTCGATTTGGCGCAAAGTTTATTCGTCCGGTTTTTGTTACTGTCGTCAGTATTCTTGCCATGAAACTGGCCTAT
GAAGCTTGGTTTGTCACGCT

Downstream 100 bases:

>100_bases
TGAATGACCTTTCCCCTCCACCACTGGAACAAGCACCGGATGAAATTAAACTGGCGGTCGATTTGATCTATCTATTGGAA
AGCAATGACGTTGATGCTGC

Product: primosomal replication protein N''

Products: NA

Alternate protein names: Primosomal Replication Protein N``; Primosomal Replication PriB And PriC; Primosomal Replication Protein N\\'

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKLQDIAQRLDKLAVQAAQLDRQRGEHHTPLFDERLFACRARLLVPCVKETKATLDALLREQKDQRLTTQRAEYLTEQLV
AQFSAIQRELSTTTIRKNEIKHASHYRKPINVLYQELAQHQEWTRRLKEMVLEKQKELDTAPAFLRTQAQQALLVTEQRL
ARCQAAMLKIENQITYREKNQ

Sequences:

>Translated_181_residues
MKLQDIAQRLDKLAVQAAQLDRQRGEHHTPLFDERLFACRARLLVPCVKETKATLDALLREQKDQRLTTQRAEYLTEQLV
AQFSAIQRELSTTTIRKNEIKHASHYRKPINVLYQELAQHQEWTRRLKEMVLEKQKELDTAPAFLRTQAQQALLVTEQRL
ARCQAAMLKIENQITYREKNQ
>Mature_181_residues
MKLQDIAQRLDKLAVQAAQLDRQRGEHHTPLFDERLFACRARLLVPCVKETKATLDALLREQKDQRLTTQRAEYLTEQLV
AQFSAIQRELSTTTIRKNEIKHASHYRKPINVLYQELAQHQEWTRRLKEMVLEKQKELDTAPAFLRTQAQQALLVTEQRL
ARCQAAMLKIENQITYREKNQ

Specific function: Pria Recognizes A Specific Hairpin Sequence On Bacteriophage Phi X174 Ssdna. This Structure Is Then Recognized And Bound By Proteins Prib And Pric. Formation Of The Primosome Proceeds With The Subsequent Actions Of Dnab, Dnac, Dnat And Primase. [C]

COG id: COG3923

COG function: function code L; Primosomal replication protein N''

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786673, Length=148, Percent_Identity=35.8108108108108, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21318; Mature: 21318

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQDIAQRLDKLAVQAAQLDRQRGEHHTPLFDERLFACRARLLVPCVKETKATLDALLR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKDQRLTTQRAEYLTEQLVAQFSAIQRELSTTTIRKNEIKHASHYRKPINVLYQELAQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEWTRRLKEMVLEKQKELDTAPAFLRTQAQQALLVTEQRLARCQAAMLKIENQITYREKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q
C
>Mature Secondary Structure
MKLQDIAQRLDKLAVQAAQLDRQRGEHHTPLFDERLFACRARLLVPCVKETKATLDALLR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKDQRLTTQRAEYLTEQLVAQFSAIQRELSTTTIRKNEIKHASHYRKPINVLYQELAQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEWTRRLKEMVLEKQKELDTAPAFLRTQAQQALLVTEQRLARCQAAMLKIENQITYREKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA