| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365412
Identifier: 27365412
GI number: 27365412
Start: 2074131
End: 2074700
Strand: Reverse
Name: 27365412
Synonym: VV1_2079
Alternate gene names: NA
Gene position: 2074700-2074131 (Counterclockwise)
Preceding gene: 326423937
Following gene: 27365411
Centisome position: 63.22
GC content: 44.39
Gene sequence:
>570_bases ATGACAGAACAAGAGTTTTTTACCGTAAATTCAACGCTGACGATCAACGTTGAGCTGTTACCTGAACACTATTTGCTGCC TTCCCTAGAGGCCTTTGAAGCGGAAATTCCAGCCCCTTTTATTGTGGCGAGTGAATTTAGCCAATTAGATCAGTTAGCCG AAAGCGCACGACTTGAACTGAAAAATAGCGATCTCAAAAACGTCATCAACCTGCTGGATGCGCAAAATTCGAAACTCAAT TTGCTGTTGAGCTTTATGTTATCGCAGCAAGACCAAGAAAACCTTCGCTTCAAAACCACCCGTTTTGGTGCCAGTCAGGT TTCGTTTTTGTCCACCGACACTATGGCGATTGGTCGCTCTACACGTGTGAAACTGTTCTTAGAAAGCCCCGCTGCGGCTA TTTATTGCTACGCGCAAGTCGCCAGTTGCGAAGCCAAAGATCAACAACATGAAGTAACAATGAAGTACGTATTGCTTCGC GATTCAGACCAAGACCTATTAATCAAAGCGGCCTTACACCAACAACAACGTCTATTGCGTCAACGTTCGCTAGAAAGAGA TACCAAATAA
Upstream 100 bases:
>100_bases TGTGCGAAATAACATCGCTTGCCAAGCGTCGCCAGTTGGCGATAATCAACAGCTTGTAGATTCTTATTTAGAATCCCATC GGCAAAAAGGGAATAACAGC
Downstream 100 bases:
>100_bases CATTCGATTATGACTTATCAACCGATTTTACAAGTCTCCACGCCCAAAGGGGCGGGAGACAAAAAATACTTGGGCCAGTT GCCTGGCGCCTCACTGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTEQEFFTVNSTLTINVELLPEHYLLPSLEAFEAEIPAPFIVASEFSQLDQLAESARLELKNSDLKNVINLLDAQNSKLN LLLSFMLSQQDQENLRFKTTRFGASQVSFLSTDTMAIGRSTRVKLFLESPAAAIYCYAQVASCEAKDQQHEVTMKYVLLR DSDQDLLIKAALHQQQRLLRQRSLERDTK
Sequences:
>Translated_189_residues MTEQEFFTVNSTLTINVELLPEHYLLPSLEAFEAEIPAPFIVASEFSQLDQLAESARLELKNSDLKNVINLLDAQNSKLN LLLSFMLSQQDQENLRFKTTRFGASQVSFLSTDTMAIGRSTRVKLFLESPAAAIYCYAQVASCEAKDQQHEVTMKYVLLR DSDQDLLIKAALHQQQRLLRQRSLERDTK >Mature_188_residues TEQEFFTVNSTLTINVELLPEHYLLPSLEAFEAEIPAPFIVASEFSQLDQLAESARLELKNSDLKNVINLLDAQNSKLNL LLSFMLSQQDQENLRFKTTRFGASQVSFLSTDTMAIGRSTRVKLFLESPAAAIYCYAQVASCEAKDQQHEVTMKYVLLRD SDQDLLIKAALHQQQRLLRQRSLERDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21531; Mature: 21400
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQEFFTVNSTLTINVELLPEHYLLPSLEAFEAEIPAPFIVASEFSQLDQLAESARLEL CCCCCEEEECCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEEC KNSDLKNVINLLDAQNSKLNLLLSFMLSQQDQENLRFKTTRFGASQVSFLSTDTMAIGRS CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCHHEECCC TRVKLFLESPAAAIYCYAQVASCEAKDQQHEVTMKYVLLRDSDQDLLIKAALHQQQRLLR CEEEEEEECCCEEEEEEHHHHCCCCCCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHH QRSLERDTK HHHHCCCCC >Mature Secondary Structure TEQEFFTVNSTLTINVELLPEHYLLPSLEAFEAEIPAPFIVASEFSQLDQLAESARLEL CCCCEEEECCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEEC KNSDLKNVINLLDAQNSKLNLLLSFMLSQQDQENLRFKTTRFGASQVSFLSTDTMAIGRS CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCHHEECCC TRVKLFLESPAAAIYCYAQVASCEAKDQQHEVTMKYVLLRDSDQDLLIKAALHQQQRLLR CEEEEEEECCCEEEEEEHHHHCCCCCCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHH QRSLERDTK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA