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The map label for this gene is 27365378

Identifier: 27365378

GI number: 27365378

Start: 2032140

End: 2032931

Strand: Reverse

Name: 27365378

Synonym: VV1_2040

Alternate gene names: NA

Gene position: 2032931-2032140 (Counterclockwise)

Preceding gene: 27365379

Following gene: 27365376

Centisome position: 61.94

GC content: 42.55

Gene sequence:

>792_bases
ATGAACATACAAACTAACGAACGCACTTACATTACAGACTTACGTACCAAGCTTAAACAGCAATTTATTCAAGAGATGCA
TAACGCGAACAAAGATCCCGATAAAGGCATTACCTTCGACGTGATGCTTGACGCTTACGAAGCTGCAAAAGCGGAAGGAA
AATGTTTTGAGAACCCAGCCCAATTACAAGCCGCGGTTGGTGGGAGGTATGTAAAAGCTCAAATAGCATTTCAAATACTC
GATTCTGCTCAACCTAATGCGAATCGATATAATCGAGAAGTTCCCCAGTGGTTTTCCAGCCCGCTAGAAACTGCACTAAA
ACTCGACATAGCGGCTTTGTGGCAAGCTGTAGAGAGTGACATTGCTAGTATTGTAGAAAGTCGAGTAAAGATAGCTGAAC
ACTGTTCTGAACAGAAACGCCTACAAGCATTACAATCCAGTGAGCTGGTCGAAGAGCTTCAAGACAAACTTGATGAGCTG
AAAGAACTACCTGCGCAACTTAGTGAACTAAAGATCGACAATGAGCGCTTAAAAACCGAAGTGAGCGTACTTGAAAACAG
AGCCTCAACTTTGCAAGCCAGTTCAGACTCTTCATTTGCCTTACAGCGTGAAAACGCGATTTTAGAAGACAACAATGCGA
AGATTAAATCTGAAAATCAGAATATGAGAAAAGAACTTGAGCGAACTGCTGCCCTCTTGCAAGAAACGCTTATCAAGAAA
GCTAACTTAGAAGGTCGCTTAGAAGAGCGCGGCGAGTTTTCTAAAACTACCAACAAACGGCATCCAAGCTAA

Upstream 100 bases:

>100_bases
CGTGCAATCAGCACGCGAATTGTGGGCTGGGAACGAGAGACTATTGAAAGATGGCTCGAAGAACAAACAACAGAGCTACC
GTACTAAGGGGTGTAAGTGA

Downstream 100 bases:

>100_bases
AAATAATACACTTTGCATCACGATAACCTATTCCCACGATTGGGAATAGGTATGATATCTTCTTATCTATTCGAGATAAC
TGAAATTAGCAATGCCTCAA

Product: DNA repair ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNIQTNERTYITDLRTKLKQQFIQEMHNANKDPDKGITFDVMLDAYEAAKAEGKCFENPAQLQAAVGGRYVKAQIAFQIL
DSAQPNANRYNREVPQWFSSPLETALKLDIAALWQAVESDIASIVESRVKIAEHCSEQKRLQALQSSELVEELQDKLDEL
KELPAQLSELKIDNERLKTEVSVLENRASTLQASSDSSFALQRENAILEDNNAKIKSENQNMRKELERTAALLQETLIKK
ANLEGRLEERGEFSKTTNKRHPS

Sequences:

>Translated_263_residues
MNIQTNERTYITDLRTKLKQQFIQEMHNANKDPDKGITFDVMLDAYEAAKAEGKCFENPAQLQAAVGGRYVKAQIAFQIL
DSAQPNANRYNREVPQWFSSPLETALKLDIAALWQAVESDIASIVESRVKIAEHCSEQKRLQALQSSELVEELQDKLDEL
KELPAQLSELKIDNERLKTEVSVLENRASTLQASSDSSFALQRENAILEDNNAKIKSENQNMRKELERTAALLQETLIKK
ANLEGRLEERGEFSKTTNKRHPS
>Mature_263_residues
MNIQTNERTYITDLRTKLKQQFIQEMHNANKDPDKGITFDVMLDAYEAAKAEGKCFENPAQLQAAVGGRYVKAQIAFQIL
DSAQPNANRYNREVPQWFSSPLETALKLDIAALWQAVESDIASIVESRVKIAEHCSEQKRLQALQSSELVEELQDKLDEL
KELPAQLSELKIDNERLKTEVSVLENRASTLQASSDSSFALQRENAILEDNNAKIKSENQNMRKELERTAALLQETLIKK
ANLEGRLEERGEFSKTTNKRHPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29860; Mature: 29860

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQTNERTYITDLRTKLKQQFIQEMHNANKDPDKGITFDVMLDAYEAAKAEGKCFENPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
QLQAAVGGRYVKAQIAFQILDSAQPNANRYNREVPQWFSSPLETALKLDIAALWQAVESD
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIVESRVKIAEHCSEQKRLQALQSSELVEELQDKLDELKELPAQLSELKIDNERLKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VSVLENRASTLQASSDSSFALQRENAILEDNNAKIKSENQNMRKELERTAALLQETLIKK
HHHHHHHHHHHHCCCCCCCEEHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANLEGRLEERGEFSKTTNKRHPS
HCCCCCHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MNIQTNERTYITDLRTKLKQQFIQEMHNANKDPDKGITFDVMLDAYEAAKAEGKCFENPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
QLQAAVGGRYVKAQIAFQILDSAQPNANRYNREVPQWFSSPLETALKLDIAALWQAVESD
HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIVESRVKIAEHCSEQKRLQALQSSELVEELQDKLDELKELPAQLSELKIDNERLKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VSVLENRASTLQASSDSSFALQRENAILEDNNAKIKSENQNMRKELERTAALLQETLIKK
HHHHHHHHHHHHCCCCCCCEEHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANLEGRLEERGEFSKTTNKRHPS
HCCCCCHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA