| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is bcp [H]
Identifier: 27365256
GI number: 27365256
Start: 1904663
End: 1905133
Strand: Reverse
Name: bcp [H]
Synonym: VV1_1910
Alternate gene names: 27365256
Gene position: 1905133-1904663 (Counterclockwise)
Preceding gene: 27365257
Following gene: 27365253
Centisome position: 58.05
GC content: 43.95
Gene sequence:
>471_bases ATGAATATGCTGCAAGCAGGCTCCCCTGCTCCAGAATTTTCTTTGCCTGATCAAAATGGAAATCTTGTCTCGCTCAAAGA CCTCAAAGGAAAAAAAGTTCTCTTTTACTTCTACCCAAAAGCAATGACTCCCGGTTGTACCGTTCAGGCTCAAGGTCTAC GTGACGTCCATAGCGAGCTCGCAAAGCATAATGTGGTTGTGCTGGGCGTAAGTATCGATCCAGTCAAACGCCTAGGTAAG TTTATTGAACGAGATTCGCTCAACTTCACTTTGTTGTCAGATGAAGATCACGCCGTTGCTGAACAATTTGGTGTTTGGGG CGAGAAAAAGTTCATGGGCAAAGTGTACGATGGCCTACACCGTATTAGTTTCCTCATCAACGAGGAAGGTGTCATTGAAC ACGTCTTTGATAAGTTCAAAACCAAAGACCACCATGAAGTGGTTCTTAATTATCTTGAGCAGAGCAAATAG
Upstream 100 bases:
>100_bases TTAATGCAGATTCAGGAAGATTTTAATGATCTTTGCCGTTCGCTGAACGTACAAGGCACGCTGAACTTTATAAAAAACAC CCTTTAAAAGGAATAATGAC
Downstream 100 bases:
>100_bases GACGAGTTAAAGCATTTTTACTTATCCAGCAGACAATAATAAGCCCAGCGTGTTCGCTGGGCTTTCTTTTATGAGTAATA AATGAATGAATTGAGTCAAT
Product: thioredoxin-dependent thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MNMLQAGSPAPEFSLPDQNGNLVSLKDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVHSELAKHNVVVLGVSIDPVKRLGK FIERDSLNFTLLSDEDHAVAEQFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFDKFKTKDHHEVVLNYLEQSK
Sequences:
>Translated_156_residues MNMLQAGSPAPEFSLPDQNGNLVSLKDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVHSELAKHNVVVLGVSIDPVKRLGK FIERDSLNFTLLSDEDHAVAEQFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFDKFKTKDHHEVVLNYLEQSK >Mature_156_residues MNMLQAGSPAPEFSLPDQNGNLVSLKDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVHSELAKHNVVVLGVSIDPVKRLGK FIERDSLNFTLLSDEDHAVAEQFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFDKFKTKDHHEVVLNYLEQSK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=66.8831168831169, Blast_Score=218, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6322180, Length=112, Percent_Identity=40.1785714285714, Blast_Score=77, Evalue=8e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17631; Mature: 17631
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLQAGSPAPEFSLPDQNGNLVSLKDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVHSEL CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHH AKHNVVVLGVSIDPVKRLGKFIERDSLNFTLLSDEDHAVAEQFGVWGEKKFMGKVYDGLH HHCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH RISFLINEEGVIEHVFDKFKTKDHHEVVLNYLEQSK HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNMLQAGSPAPEFSLPDQNGNLVSLKDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVHSEL CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHH AKHNVVVLGVSIDPVKRLGKFIERDSLNFTLLSDEDHAVAEQFGVWGEKKFMGKVYDGLH HHCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH RISFLINEEGVIEHVFDKFKTKDHHEVVLNYLEQSK HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]