| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365201
Identifier: 27365201
GI number: 27365201
Start: 1847267
End: 1848304
Strand: Reverse
Name: 27365201
Synonym: VV1_1853
Alternate gene names: NA
Gene position: 1848304-1847267 (Counterclockwise)
Preceding gene: 27365204
Following gene: 27365199
Centisome position: 56.32
GC content: 48.55
Gene sequence:
>1038_bases ATGGATACCATACACACTCTCAGTCAACTCCTTACCGCCAGCGACTGCCAATACGCCATTTATGATTTGGGCCGCCGTAT CAATCCAATCAGCCAAACGCAATTTGCCGAGATAGAAAAAGGCTCAGCGCCTTATCCTTACCCTCTGCAACGGAAAGCCA ATTTGGCGATTGTGTATTGGAATGAGCAAAAGCAACCATGGATTTGGTTTTTGAAATTTGAACTCGACGAGCGTGGTCTA TTGAAGCAAGCAGACATCGGCAACTTCATTAAATTTGTCGTAGAAGCGATGGGAACGCGTTTATCGCAAGAAATGAGTGA AGAACAGCAACAGAAGTTGGCGAACAATCCTTATACGTTTAAGCCTTCTGAAGACAAAATGGCGGTATTTCATAGCTTGG TGCGCGCGCAATTGCAGTTACCGACCAGCCAATACTACGAACACGCCCAAATCTATTTCCAAGGGAAATTGGGTTGGGAA AACTGGCAAACCGTTGGCTTGCAGGGCATTACCGACATCTGTGCTCGATTGGATCAAGAGCAAAATGGCGTGCTAATACG CAAGGCACTGGCGCACCTTCCTTCAACCCCATTGTATGCTCTGCTTGGTGCGTTAGAGCATGTCACCTTGCCTGAAAAGC TAACAGCCCGCTTAATCGAGCTCACTGAAGGTGAAATCGCCAAGCCACACCCTGATCTGTTTTTGCTCTCTGCGCTGATT CGTGCGCTGTCAGGCGCAGAGCAAGCACAAGTGAAACCCCTGCTGAACACACTGCTCGCCAGTCCTAGATTGAGCCATCA GGAAGTGTTGATTGGTATTGCCGGTCGCGCTTGGCATTGGTTGGCTGAAACGGAGGTCGCACAGCTCTTTTTGGTTCGTT TGGCACAAACGGGTAATCAAAACCTGTTCAACCAGCTGTTTGCCGACTTAGTGATGCTTCCACAGCTCAGAATGGTGCTA TTGCCTCTGCTGCACTCCAGCCCATCACCAGAGCTGGCCAATGCACTTTTAAATCTACAACAGGCTACAAAAGGATAA
Upstream 100 bases:
>100_bases CAAAGTTGAGGTGTTTGTCATTAATCTTTACATTCCGAACCTTGAATTAGCCGCGAATGATACCATTTATTGAAGAAATA AAGTTAGGACAACATGCTTC
Downstream 100 bases:
>100_bases ACCATGGTCGGTGATTTGTTTGCCATCTTAGGATTGTGTTTCTTCTGTTTTCTCTTTTGGCAACAACGTCGCCAATCGGA ACTGGCCAAGGCTGCGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALAHLPSTPLYALLGALEHVTLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG
Sequences:
>Translated_345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALAHLPSTPLYALLGALEHVTLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG >Mature_345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALAHLPSTPLYALLGALEHVTLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38982; Mature: 38982
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYW CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NEQKQPWIWFLKFELDERGLLKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTF CCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWENWQTVGLQGITDICARLDQE CCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHCCCC QNGVLIRKALAHLPSTPLYALLGALEHVTLPEKLTARLIELTEGEIAKPHPDLFLLSALI CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQ HHHCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH NLFNQLFADLVMLPQLRMVLLPLLHSSPSPELANALLNLQQATKG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYW CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NEQKQPWIWFLKFELDERGLLKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTF CCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWENWQTVGLQGITDICARLDQE CCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHCCCC QNGVLIRKALAHLPSTPLYALLGALEHVTLPEKLTARLIELTEGEIAKPHPDLFLLSALI CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQ HHHCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH NLFNQLFADLVMLPQLRMVLLPLLHSSPSPELANALLNLQQATKG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA