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The map label for this gene is yaeB [H]

Identifier: 27365190

GI number: 27365190

Start: 1836343

End: 1837038

Strand: Reverse

Name: yaeB [H]

Synonym: VV1_1839

Alternate gene names: 27365190

Gene position: 1837038-1836343 (Counterclockwise)

Preceding gene: 27365193

Following gene: 27365189

Centisome position: 55.98

GC content: 50.0

Gene sequence:

>696_bases
ATGCACTCCATTGATCCTATTGGCTTTATTGAGAGCCCCTATAAAGAGAAATTCGCGGTCCCCAGACAACCTCGCTTAGT
CCCTGCTGCGAGAGCACGGGTAAAACTGGTTGGCAGTGCCAACACGCCCGAGTCAGTAAGAGGTTTGGCGCAATTTTCCC
ACGTTTGGTTGCTGTTTTTGTTTGATCAAAACTTGGCCGCCGGTTGGAAACCCACCGTTCGCCCACCTCGCCTAGGTGGC
AATGAGCGCATGGGTGTATTTGCCACCCGTTCAACGTTTCGCCCCAACGGCATTGGCATGTCAGCGGTGGAAATGAAAGG
GATAACTAAACAAGGCGATCAGGTCTATCTCGATCTTGGCAGTGTGGATTTGGTGGACGGGACCCCAATCATTGATATCA
AACCTTACATCCCCTATTCCGACGCGATTCTCGATGCCGTCGGTGGCTACGCAGAGTCAGAACCCGAGCGCTCACTCGTG
ATCTTCTCCAGTGAAGCGGATGCGCTATTGGCGACACGACCTAATGGAACGCTAGAGAAACAGGTCATTGAGCAAGTTTT
GGCACAAGATCCTCGCCCTGCCTATAAGAAAAACAAACCGGATGAGAAAGAATATGCGGTAAATTTGTTCGATTTGAACG
TCAAATTCATTATCCAAGATAAGATAGTGACGGTTAGCCGCATCGAACGCTTTTGA

Upstream 100 bases:

>100_bases
TTATGTTATAACATATTAATTAATAATTATTATCAACAAGAAATGCAAGAGAAAACTGTGATATTTTTCAGTCCATCTGT
TGTTTTTTATTTGACTCACT

Downstream 100 bases:

>100_bases
CAATCACAAATGGCTGATATCATAGTCAGCTTAATTTTGTTCCCTCACTTTTGAGGGGTTATTCAAACCATGATGAAACG
GATACCATAGAATGCGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MHSIDPIGFIESPYKEKFAVPRQPRLVPAARARVKLVGSANTPESVRGLAQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERMGVFATRSTFRPNGIGMSAVEMKGITKQGDQVYLDLGSVDLVDGTPIIDIKPYIPYSDAILDAVGGYAESEPERSLV
IFSSEADALLATRPNGTLEKQVIEQVLAQDPRPAYKKNKPDEKEYAVNLFDLNVKFIIQDKIVTVSRIERF

Sequences:

>Translated_231_residues
MHSIDPIGFIESPYKEKFAVPRQPRLVPAARARVKLVGSANTPESVRGLAQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERMGVFATRSTFRPNGIGMSAVEMKGITKQGDQVYLDLGSVDLVDGTPIIDIKPYIPYSDAILDAVGGYAESEPERSLV
IFSSEADALLATRPNGTLEKQVIEQVLAQDPRPAYKKNKPDEKEYAVNLFDLNVKFIIQDKIVTVSRIERF
>Mature_231_residues
MHSIDPIGFIESPYKEKFAVPRQPRLVPAARARVKLVGSANTPESVRGLAQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERMGVFATRSTFRPNGIGMSAVEMKGITKQGDQVYLDLGSVDLVDGTPIIDIKPYIPYSDAILDAVGGYAESEPERSLV
IFSSEADALLATRPNGTLEKQVIEQVLAQDPRPAYKKNKPDEKEYAVNLFDLNVKFIIQDKIVTVSRIERF

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=141, Percent_Identity=41.8439716312057, Blast_Score=116, Evalue=2e-26,
Organism=Escherichia coli, GI1786393, Length=231, Percent_Identity=52.8138528138528, Blast_Score=242, Evalue=2e-65,
Organism=Drosophila melanogaster, GI45552503, Length=280, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24586408, Length=139, Percent_Identity=46.7625899280576, Blast_Score=110, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 25657; Mature: 25657

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIDPIGFIESPYKEKFAVPRQPRLVPAARARVKLVGSANTPESVRGLAQFSHVWLLFL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEE
FDQNLAAGWKPTVRPPRLGGNERMGVFATRSTFRPNGIGMSAVEMKGITKQGDQVYLDLG
ECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEC
SVDLVDGTPIIDIKPYIPYSDAILDAVGGYAESEPERSLVIFSSEADALLATRPNGTLEK
CEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHH
QVIEQVLAQDPRPAYKKNKPDEKEYAVNLFDLNVKFIIQDKIVTVSRIERF
HHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECEEEEEEECCEEEHHHHHCC
>Mature Secondary Structure
MHSIDPIGFIESPYKEKFAVPRQPRLVPAARARVKLVGSANTPESVRGLAQFSHVWLLFL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEE
FDQNLAAGWKPTVRPPRLGGNERMGVFATRSTFRPNGIGMSAVEMKGITKQGDQVYLDLG
ECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEC
SVDLVDGTPIIDIKPYIPYSDAILDAVGGYAESEPERSLVIFSSEADALLATRPNGTLEK
CEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHH
QVIEQVLAQDPRPAYKKNKPDEKEYAVNLFDLNVKFIIQDKIVTVSRIERF
HHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECEEEEEEECCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]