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The map label for this gene is yebE [H]

Identifier: 27365188

GI number: 27365188

Start: 1833745

End: 1834413

Strand: Reverse

Name: yebE [H]

Synonym: VV1_1837

Alternate gene names: 27365188

Gene position: 1834413-1833745 (Counterclockwise)

Preceding gene: 27365189

Following gene: 27365187

Centisome position: 55.9

GC content: 47.83

Gene sequence:

>669_bases
ATGGATCTAAAAAGTCTTCTCAATCAAGCCCTCAACTCTGATCTTTTAAAACAAGGTTCAGAGGCATTGAACAAACAGAC
CCAAAATCTCAAAAACAACACCAACGCCAGTCAACTCAAAACACTCGGTGCTGGCGCATTGGGTGGCGGCCTCATCGGCA
TGCTGATGGGTTCAAAAAAAAGCGGAAAGATGGCCAAGAAGCTTGGCAAGAATGCACTCAAAATTGGTGGCGCCGCAGCC
TTAGGTGCGTTGGCTTATAAGGTTTACAACGACTGGCAAGGAACTCAACCAAACACTGGCGTGGCGGAAGCTTACGACCC
ACAAGATAATCACCACTCAGTGCTGATCATCAAAGCGATGATAGCGATGGCCAAAGCAGATGGTCATATTGACCAGCAGG
AAATGGCCCAGATTGAGCAAGCACTCAGTGAGATGAACGCCGATGAACAGGTGCGACAACTCGTTCAACAAGAGCTGCAA
AAACCACTCGACCCAACCGACATTGCCAAGTTAGCGACATCACCACAGCAAGCAAGTGAAATTTACCTTGCCTCGCTGAT
CATCGCAGACGAACAAAGCTTTATGGAAAAAGCGTATTTGCAAGAACTTGCGAAGCAGCTGCAACTGGCCCCTGAAGTCA
TCGAACAACTTGAACAGCAATTGCGTTGA

Upstream 100 bases:

>100_bases
ACAGTTAAAAGGGATTGGTCAAGGCCAATCCCTTTTCTATTAATCTTTGGTTCAGATTTCTCCCGTTATGCTTGCCTTAT
GTTTAGTCAGGAGAGTCGTC

Downstream 100 bases:

>100_bases
TGAATCTTTGCTCAGAGGGGTAATTAACTTGCGCCAAAACAACTCTGAGCTTTGAGTTTCAAAACCACACTGTGTATATT
TGAGAGCAGTTATCATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDLKSLLNQALNSDLLKQGSEALNKQTQNLKNNTNASQLKTLGAGALGGGLIGMLMGSKKSGKMAKKLGKNALKIGGAAA
LGALAYKVYNDWQGTQPNTGVAEAYDPQDNHHSVLIIKAMIAMAKADGHIDQQEMAQIEQALSEMNADEQVRQLVQQELQ
KPLDPTDIAKLATSPQQASEIYLASLIIADEQSFMEKAYLQELAKQLQLAPEVIEQLEQQLR

Sequences:

>Translated_222_residues
MDLKSLLNQALNSDLLKQGSEALNKQTQNLKNNTNASQLKTLGAGALGGGLIGMLMGSKKSGKMAKKLGKNALKIGGAAA
LGALAYKVYNDWQGTQPNTGVAEAYDPQDNHHSVLIIKAMIAMAKADGHIDQQEMAQIEQALSEMNADEQVRQLVQQELQ
KPLDPTDIAKLATSPQQASEIYLASLIIADEQSFMEKAYLQELAKQLQLAPEVIEQLEQQLR
>Mature_222_residues
MDLKSLLNQALNSDLLKQGSEALNKQTQNLKNNTNASQLKTLGAGALGGGLIGMLMGSKKSGKMAKKLGKNALKIGGAAA
LGALAYKVYNDWQGTQPNTGVAEAYDPQDNHHSVLIIKAMIAMAKADGHIDQQEMAQIEQALSEMNADEQVRQLVQQELQ
KPLDPTDIAKLATSPQQASEIYLASLIIADEQSFMEKAYLQELAKQLQLAPEVIEQLEQQLR

Specific function: Unknown

COG id: COG2979

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788151, Length=170, Percent_Identity=34.1176470588235, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007486 [H]

Pfam domain/function: PF04391 DUF533 [H]

EC number: NA

Molecular weight: Translated: 24052; Mature: 24052

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKSLLNQALNSDLLKQGSEALNKQTQNLKNNTNASQLKTLGAGALGGGLIGMLMGSKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCCC
SGKMAKKLGKNALKIGGAAALGALAYKVYNDWQGTQPNTGVAEAYDPQDNHHSVLIIKAM
CHHHHHHHCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IAMAKADGHIDQQEMAQIEQALSEMNADEQVRQLVQQELQKPLDPTDIAKLATSPQQASE
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH
IYLASLIIADEQSFMEKAYLQELAKQLQLAPEVIEQLEQQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLKSLLNQALNSDLLKQGSEALNKQTQNLKNNTNASQLKTLGAGALGGGLIGMLMGSKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCCC
SGKMAKKLGKNALKIGGAAALGALAYKVYNDWQGTQPNTGVAEAYDPQDNHHSVLIIKAM
CHHHHHHHCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
IAMAKADGHIDQQEMAQIEQALSEMNADEQVRQLVQQELQKPLDPTDIAKLATSPQQASE
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH
IYLASLIIADEQSFMEKAYLQELAKQLQLAPEVIEQLEQQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]