| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yejM [C]
Identifier: 27365147
GI number: 27365147
Start: 1785004
End: 1786827
Strand: Reverse
Name: yejM [C]
Synonym: VV1_1794
Alternate gene names: 27365147
Gene position: 1786827-1785004 (Counterclockwise)
Preceding gene: 27365151
Following gene: 27365145
Centisome position: 54.45
GC content: 47.86
Gene sequence:
>1824_bases ATGTTGCGAAAACTCTCCTCCAATAGCGCGTGGCTGATTGCTTTTTTTGCTTGCTTCACGGTTTATCTGTCCATCGCCTG TTACCCGTTTGTACTCTCATCCGATCCCTCTCAAGATCTATCGGGACTACAAAGCTTCTATCTTATTGCAACCCAGCTGG GCTGGCTCGGTTTACTCAGCTTACCCATCATGCTGCTCAGTCTTCCACTGACACTGTTGCCAACTCGACTGTTCAAAGGC ATCGTCATCACACTTGCCGCTCTGTTAGTGATTGCGCTGAAGATCGATATCACGGTTTTCCAACACTACAAATTTCATAT CAATGGCTTGCTGATCCGCATGTTTTTTGATGGCGGGAACGAAGTCTTCAATATCTCTTGGTTAAGTTGGTTGATTTTCA TCTCGGAGATTGCGGTGATGTTCATTGGCCTCGCCATCGCGGTATGGCTCAGCAAGCTTCTCGCTAACAGCAAACTCAAA TTCGCTTTTGTCGCATTATGGTTTGTGATGTTGCTGAGCAGCCAAATGGTGCATGCGTATAAAAATGCGTTGTACGACAA TGAAGTCAGCCAATTTACCAATAACTGGCCGCTTTATTACCCACTCACCGCCCGCTCTTTCATGTACAAAAACGGCTTTG TCGATGAAAAGATTGCGGCGCAAAATCGCGTTGAGTTGAAAAACGTCGAGGGCAGTCAACTGGACTACCCACTTGAGCCC GTCAGCTTACCGACACAAACAAAACAGCCCAACGTGCTGTTTATCTTAGTGGACGCTTGGCGACACAGCGACGCCACGGC AGAAATTATGCCTAACGTCAGCCAATTTGCACAAAAGACGGCCAACTTTTCGCAGCACATGAGTGGCGGCAATTCTACCC AAGCGGGCATGTTTAGCCTGTTCTATAGCCTGCCTGCCACCTATTGGGACAGTTTTTACGCCAGTCAAACCGCTCCAGTG TTTATGGATAGCCTGCAAAGCGCCGGATATCGCATGGGGATCTTCGGTTCAGCGTCGCTGACCAGCCCTCCTTTGTCACG CACTGTCTTTAAAAACGTCAAAGATCTGCGCTTGAAGACGCCAGGAGCAACACAAGTTGAACGCGACGCGCGTATTACTG AAGATTTTATCGCCTTTGAAGCGCAGCCAAGTGATCAGCCCTATTTCGGTTTTCTGTTCTACGACTCTGCCCATGGCACC GAATTTCCTGAACCAGAAGGTGCGAAATTCACACCGTATTGGGAACGCGTGGATCATATCTTGCTCAACAACGATTTTGA TGCTGAGCTGTACCATAATCGCTATAAGAATTCGCTCTACTACATTGATGGCTTAATCGGCAAAGTACTGAGCAAGATTG ATTTGGAGAACACCATCGTGGTCATCACCTCGGATCATGGTGAAGAGTTTAACGATAATCGCATGAACTATTGGGGGCAT TCTGGCAATTACAGCCAAGCGCAAATCCACGTGCCGTTGTACATCTACGCACCTGGCCAAACCGCCAAGACTTACGATTA TCGCACCACCCACTTTGATGTGGTGCCCACGCTGATGGAAATGCTCTTTGATAATAAAATTAATACCGCAGATTTCAGCG TCGGCGACAACTTGTTCGACGCGACCAAATCTCGAGATTGGTTTATCGCGGGGAGCTACTACAACTATGCACTCGTCGGC CAAGAGATGATGATGGTGGTTAACCCCGCAGGGAACTCAAAACAGCTCAACAACCAATTGAAGATAGTTAAGGACCATAA AGTGCCTGTTAATGTGATTCAGCAGTCACTGGAGCTGATGTCGCGCTTCTATCACAAGGGCTAA
Upstream 100 bases:
>100_bases AATGTGACACGCTTCACGTCTTTAAAGTTAAAAAACACTGTTTTATACTTCCGCTCGTTTTTATCAAAATTATTTATAAC TCGCTATGGGATTCAAAAAG
Downstream 100 bases:
>100_bases CGACCGTTTTTCTCGCCGCTAAACAAAAACGCCTCGCATGATGAACTGCGAGGCGTTTTTTCACTTCTACACCATTCGAC ACTAGGCGAATTTTCCAAGC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MLRKLSSNSAWLIAFFACFTVYLSIACYPFVLSSDPSQDLSGLQSFYLIATQLGWLGLLSLPIMLLSLPLTLLPTRLFKG IVITLAALLVIALKIDITVFQHYKFHINGLLIRMFFDGGNEVFNISWLSWLIFISEIAVMFIGLAIAVWLSKLLANSKLK FAFVALWFVMLLSSQMVHAYKNALYDNEVSQFTNNWPLYYPLTARSFMYKNGFVDEKIAAQNRVELKNVEGSQLDYPLEP VSLPTQTKQPNVLFILVDAWRHSDATAEIMPNVSQFAQKTANFSQHMSGGNSTQAGMFSLFYSLPATYWDSFYASQTAPV FMDSLQSAGYRMGIFGSASLTSPPLSRTVFKNVKDLRLKTPGATQVERDARITEDFIAFEAQPSDQPYFGFLFYDSAHGT EFPEPEGAKFTPYWERVDHILLNNDFDAELYHNRYKNSLYYIDGLIGKVLSKIDLENTIVVITSDHGEEFNDNRMNYWGH SGNYSQAQIHVPLYIYAPGQTAKTYDYRTTHFDVVPTLMEMLFDNKINTADFSVGDNLFDATKSRDWFIAGSYYNYALVG QEMMMVVNPAGNSKQLNNQLKIVKDHKVPVNVIQQSLELMSRFYHKG
Sequences:
>Translated_607_residues MLRKLSSNSAWLIAFFACFTVYLSIACYPFVLSSDPSQDLSGLQSFYLIATQLGWLGLLSLPIMLLSLPLTLLPTRLFKG IVITLAALLVIALKIDITVFQHYKFHINGLLIRMFFDGGNEVFNISWLSWLIFISEIAVMFIGLAIAVWLSKLLANSKLK FAFVALWFVMLLSSQMVHAYKNALYDNEVSQFTNNWPLYYPLTARSFMYKNGFVDEKIAAQNRVELKNVEGSQLDYPLEP VSLPTQTKQPNVLFILVDAWRHSDATAEIMPNVSQFAQKTANFSQHMSGGNSTQAGMFSLFYSLPATYWDSFYASQTAPV FMDSLQSAGYRMGIFGSASLTSPPLSRTVFKNVKDLRLKTPGATQVERDARITEDFIAFEAQPSDQPYFGFLFYDSAHGT EFPEPEGAKFTPYWERVDHILLNNDFDAELYHNRYKNSLYYIDGLIGKVLSKIDLENTIVVITSDHGEEFNDNRMNYWGH SGNYSQAQIHVPLYIYAPGQTAKTYDYRTTHFDVVPTLMEMLFDNKINTADFSVGDNLFDATKSRDWFIAGSYYNYALVG QEMMMVVNPAGNSKQLNNQLKIVKDHKVPVNVIQQSLELMSRFYHKG >Mature_607_residues MLRKLSSNSAWLIAFFACFTVYLSIACYPFVLSSDPSQDLSGLQSFYLIATQLGWLGLLSLPIMLLSLPLTLLPTRLFKG IVITLAALLVIALKIDITVFQHYKFHINGLLIRMFFDGGNEVFNISWLSWLIFISEIAVMFIGLAIAVWLSKLLANSKLK FAFVALWFVMLLSSQMVHAYKNALYDNEVSQFTNNWPLYYPLTARSFMYKNGFVDEKIAAQNRVELKNVEGSQLDYPLEP VSLPTQTKQPNVLFILVDAWRHSDATAEIMPNVSQFAQKTANFSQHMSGGNSTQAGMFSLFYSLPATYWDSFYASQTAPV FMDSLQSAGYRMGIFGSASLTSPPLSRTVFKNVKDLRLKTPGATQVERDARITEDFIAFEAQPSDQPYFGFLFYDSAHGT EFPEPEGAKFTPYWERVDHILLNNDFDAELYHNRYKNSLYYIDGLIGKVLSKIDLENTIVVITSDHGEEFNDNRMNYWGH SGNYSQAQIHVPLYIYAPGQTAKTYDYRTTHFDVVPTLMEMLFDNKINTADFSVGDNLFDATKSRDWFIAGSYYNYALVG QEMMMVVNPAGNSKQLNNQLKIVKDHKVPVNVIQQSLELMSRFYHKG
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yejM [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=603, Percent_Identity=25.5389718076285, Blast_Score=194, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 68978; Mature: 68978
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLSSNSAWLIAFFACFTVYLSIACYPFVLSSDPSQDLSGLQSFYLIATQLGWLGLLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH LPIMLLSLPLTLLPTRLFKGIVITLAALLVIALKIDITVFQHYKFHINGLLIRMFFDGGN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECEEEEEEEECCCC EVFNISWLSWLIFISEIAVMFIGLAIAVWLSKLLANSKLKFAFVALWFVMLLSSQMVHAY CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KNALYDNEVSQFTNNWPLYYPLTARSFMYKNGFVDEKIAAQNRVELKNVEGSQLDYPLEP HHHHCCCHHHHHCCCCCEEEEECHHHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCCCC VSLPTQTKQPNVLFILVDAWRHSDATAEIMPNVSQFAQKTANFSQHMSGGNSTQAGMFSL CCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FYSLPATYWDSFYASQTAPVFMDSLQSAGYRMGIFGSASLTSPPLSRTVFKNVKDLRLKT HHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCHHHCEEEC PGATQVERDARITEDFIAFEAQPSDQPYFGFLFYDSAHGTEFPEPEGAKFTPYWERVDHI CCCCCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCEE LLNNDFDAELYHNRYKNSLYYIDGLIGKVLSKIDLENTIVVITSDHGEEFNDNRMNYWGH EECCCCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCC SGNYSQAQIHVPLYIYAPGQTAKTYDYRTTHFDVVPTLMEMLFDNKINTADFSVGDNLFD CCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ATKSRDWFIAGSYYNYALVGQEMMMVVNPAGNSKQLNNQLKIVKDHKVPVNVIQQSLELM HCCCCCEEEEECCCCEEEECCEEEEEECCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHH SRFYHKG HHHHCCC >Mature Secondary Structure MLRKLSSNSAWLIAFFACFTVYLSIACYPFVLSSDPSQDLSGLQSFYLIATQLGWLGLLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH LPIMLLSLPLTLLPTRLFKGIVITLAALLVIALKIDITVFQHYKFHINGLLIRMFFDGGN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECEEEEEEEECCCC EVFNISWLSWLIFISEIAVMFIGLAIAVWLSKLLANSKLKFAFVALWFVMLLSSQMVHAY CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KNALYDNEVSQFTNNWPLYYPLTARSFMYKNGFVDEKIAAQNRVELKNVEGSQLDYPLEP HHHHCCCHHHHHCCCCCEEEEECHHHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCCCC VSLPTQTKQPNVLFILVDAWRHSDATAEIMPNVSQFAQKTANFSQHMSGGNSTQAGMFSL CCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FYSLPATYWDSFYASQTAPVFMDSLQSAGYRMGIFGSASLTSPPLSRTVFKNVKDLRLKT HHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCHHHCEEEC PGATQVERDARITEDFIAFEAQPSDQPYFGFLFYDSAHGTEFPEPEGAKFTPYWERVDHI CCCCCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCEE LLNNDFDAELYHNRYKNSLYYIDGLIGKVLSKIDLENTIVVITSDHGEEFNDNRMNYWGH EECCCCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCC SGNYSQAQIHVPLYIYAPGQTAKTYDYRTTHFDVVPTLMEMLFDNKINTADFSVGDNLFD CCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ATKSRDWFIAGSYYNYALVGQEMMMVVNPAGNSKQLNNQLKIVKDHKVPVNVIQQSLELM HCCCCCEEEEECCCCEEEECCEEEEEECCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHH SRFYHKG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]