Click here to switch to the map view.

The map label for this gene is ygjI [H]

Identifier: 27365121

GI number: 27365121

Start: 1753663

End: 1755096

Strand: Reverse

Name: ygjI [H]

Synonym: VV1_1765

Alternate gene names: 27365121

Gene position: 1755096-1753663 (Counterclockwise)

Preceding gene: 27365122

Following gene: 27365120

Centisome position: 53.48

GC content: 51.05

Gene sequence:

>1434_bases
ATGTCTGATACTAAACGGAACACCATAGGTAAATTCGGCCTCTTGTCCCTGACATTTGCCGCTGTGTTTAGCTTCAATAA
CGTCATTAACAACAACATCGAGATCGGGCTGGCGTCAGCACCGATGTTCTTCTTAGCGACCATTTTTTACTTCATCCCTT
TCTGTTTGATCATCGCGGAATTCGTTTCGCTCAATAAAAACTCCGAAGCGGGAGTTTACGCTTGGGTGAAAAGTTCACTG
GGCGGCCGTTGGGCTTTCATCTCCGCTTACACCTACTGGTTTGTTAACCTGTTTTTCTTTACCTCGTTGCTGCCGCGCGT
CATCGCCTATGCGTCTTACGCGTTTTTAGGCTACGAGTACATTCTTACCCCGTTTGCCACCACCGCATTGAGCATGCTGT
TGTTCGCTTTTGCCACTTACGTCTCCACCAATGGTGCGAAAATGTTGGGTCCCATCACTTCAGTAACCTCTTCACTGATG
CTGCTCCTAACGCTCTCTTACATCTTGCTCTCCGGCGCTGCTCTGCTAGGTGGCGTGCAACCGGCAGACCCAATCACAGT
GGAAGCGATGGTGCCAGAATTTAGCTGGGCCTTCCTCGGCATTACCACGTGGATCTTCATGGCTGCCGGCGGCGCGGAAT
CGGTCGCGGTCTACGTCAACGATGTGAAAGGCGGCTCAAAATCGTTCGTCAAAGTGATCATCGTGGCTGGCATCTTCATC
GGTGTGCTTTACTCGGTTGCTTCCGTGTTGATTAACGTGTTTGTTTCCAGCAGCGAGCTGAAATTCACTGGCGGCTCCGT
GCAAGTGTTTGAAGGGTTAGCGAGCTACTTTGGCTTACCTGAAATTATGATGAATCGCTTTGTTGGTTTGGTTTCGTTCA
CCGCGATGTTTGGCTCGCTACTGATGTGGACCGCAACCCCAGTGAAGATCTTCTTCTCTGAGATTCCAGAAGGCATCTTT
GGTAAGAAAACGGTGGAACTGAATGAAAACGGCGTGCCAGCGCGTGCCGCTTGGATTCAATACGCCATCGTTCTACCGCT
CATGGTGATCCCAACATTGGGCTCAGACACCGCGCAAGATCTGATGAACACCGTGATCAACATGACCGCCGCTGCGTCGA
TGCTGCCACCGCTGTTCATCATGCTGGCGTATCTGAATCTGCGTCTCAAGCTCGACCATCTCGAGCGCGATTTCAAAATG
GGTTCTCGCATGACGGGGATCGTTGCAGTCTCGATTCTGATTGGCATCTTCACGGTTGGATTCTTGGCATCCACCTTCCC
AACCGGGGCCGACATCATGACCATCATTTTCTACAACGTTGGCGGCATTGTGATTTTCCTTGGCTTTGCTTGGTGGAAAT
ACAGCCAGTACGAAAAGTCACTCAACAGTGAAGAACGCGCGAAAGAGGCCAGCCCAAGCGCCGTCCTTCCATAA

Upstream 100 bases:

>100_bases
CACGGCAGAAAATAGAGCAATAAAGATAAATAAAGACGAGAGCGACAGCATGAACTGTCGCTCCACCCTACAAAATAACG
TGCCTCTTCGGAGAAAAAAC

Downstream 100 bases:

>100_bases
ATGACGCTCAACCAGTCTAGGTTGATGACCGAAAACTTGGGCAGAGAAAACCGCTCTGCCCTTCACCCTGCCCGCCCCCA
TAACAACTCTAATGGCTGGC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSDTKRNTIGKFGLLSLTFAAVFSFNNVINNNIEIGLASAPMFFLATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSL
GGRWAFISAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYILTPFATTALSMLLFAFATYVSTNGAKMLGPITSVTSSLM
LLLTLSYILLSGAALLGGVQPADPITVEAMVPEFSWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIIVAGIFI
GVLYSVASVLINVFVSSSELKFTGGSVQVFEGLASYFGLPEIMMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIF
GKKTVELNENGVPARAAWIQYAIVLPLMVIPTLGSDTAQDLMNTVINMTAAASMLPPLFIMLAYLNLRLKLDHLERDFKM
GSRMTGIVAVSILIGIFTVGFLASTFPTGADIMTIIFYNVGGIVIFLGFAWWKYSQYEKSLNSEERAKEASPSAVLP

Sequences:

>Translated_477_residues
MSDTKRNTIGKFGLLSLTFAAVFSFNNVINNNIEIGLASAPMFFLATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSL
GGRWAFISAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYILTPFATTALSMLLFAFATYVSTNGAKMLGPITSVTSSLM
LLLTLSYILLSGAALLGGVQPADPITVEAMVPEFSWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIIVAGIFI
GVLYSVASVLINVFVSSSELKFTGGSVQVFEGLASYFGLPEIMMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIF
GKKTVELNENGVPARAAWIQYAIVLPLMVIPTLGSDTAQDLMNTVINMTAAASMLPPLFIMLAYLNLRLKLDHLERDFKM
GSRMTGIVAVSILIGIFTVGFLASTFPTGADIMTIIFYNVGGIVIFLGFAWWKYSQYEKSLNSEERAKEASPSAVLP
>Mature_476_residues
SDTKRNTIGKFGLLSLTFAAVFSFNNVINNNIEIGLASAPMFFLATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLG
GRWAFISAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYILTPFATTALSMLLFAFATYVSTNGAKMLGPITSVTSSLML
LLTLSYILLSGAALLGGVQPADPITVEAMVPEFSWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIIVAGIFIG
VLYSVASVLINVFVSSSELKFTGGSVQVFEGLASYFGLPEIMMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFG
KKTVELNENGVPARAAWIQYAIVLPLMVIPTLGSDTAQDLMNTVINMTAAASMLPPLFIMLAYLNLRLKLDHLERDFKMG
SRMTGIVAVSILIGIFTVGFLASTFPTGADIMTIIFYNVGGIVIFLGFAWWKYSQYEKSLNSEERAKEASPSAVLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994921, Length=474, Percent_Identity=87.7637130801688, Blast_Score=817, Evalue=0.0,
Organism=Escherichia coli, GI87081798, Length=435, Percent_Identity=21.8390804597701, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI87082380, Length=425, Percent_Identity=25.6470588235294, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787768, Length=396, Percent_Identity=22.4747474747475, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51963; Mature: 51832

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTKRNTIGKFGLLSLTFAAVFSFNNVINNNIEIGLASAPMFFLATIFYFIPFCLIIAE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
FVSLNKNSEAGVYAWVKSSLGGRWAFISAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEY
HHHCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTPFATTALSMLLFAFATYVSTNGAKMLGPITSVTSSLMLLLTLSYILLSGAALLGGVQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PADPITVEAMVPEFSWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIIVAGIFI
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
GVLYSVASVLINVFVSSSELKFTGGSVQVFEGLASYFGLPEIMMNRFVGLVSFTAMFGSL
HHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQYAIVLPLMVIPTLGSDTAQD
HHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LMNTVINMTAAASMLPPLFIMLAYLNLRLKLDHLERDFKMGSRMTGIVAVSILIGIFTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLASTFPTGADIMTIIFYNVGGIVIFLGFAWWKYSQYEKSLNSEERAKEASPSAVLP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDTKRNTIGKFGLLSLTFAAVFSFNNVINNNIEIGLASAPMFFLATIFYFIPFCLIIAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
FVSLNKNSEAGVYAWVKSSLGGRWAFISAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEY
HHHCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTPFATTALSMLLFAFATYVSTNGAKMLGPITSVTSSLMLLLTLSYILLSGAALLGGVQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PADPITVEAMVPEFSWAFLGITTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIIVAGIFI
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
GVLYSVASVLINVFVSSSELKFTGGSVQVFEGLASYFGLPEIMMNRFVGLVSFTAMFGSL
HHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQYAIVLPLMVIPTLGSDTAQD
HHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LMNTVINMTAAASMLPPLFIMLAYLNLRLKLDHLERDFKMGSRMTGIVAVSILIGIFTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLASTFPTGADIMTIIFYNVGGIVIFLGFAWWKYSQYEKSLNSEERAKEASPSAVLP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]