| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27365118
Identifier: 27365118
GI number: 27365118
Start: 1748099
End: 1749493
Strand: Reverse
Name: 27365118
Synonym: VV1_1761
Alternate gene names: NA
Gene position: 1749493-1748099 (Counterclockwise)
Preceding gene: 326423884
Following gene: 27365116
Centisome position: 53.31
GC content: 52.19
Gene sequence:
>1395_bases GTGACGCCACCTTCGCCATTTTACACGCGCGCCTTATTGACACTGCTCCTGTTAGGATTGGTGGTGTTTAGTTTTAATCC GTTTCTCGATCGCAACGATCTGCTTCCGCTTTACGACAGCAAACGCCTGTTTGTGCTGTTTCTGTTGCAGATCACCACGC TTATCGTGCTGTTCTCCACTCAACAGCGACAGCGCATCATCGATCATTGGTGCTCACTCACGCTCCTCCACCGAGGTTTA CTGAGTCTTTTTATTGCTTCGAGCTTACTGGCCACATGGCTTGCTCGCTATCCACTGGCCGCTGTTTTGCAATGGTTTTA TTTGGCAGGATTGGTTTTGATGCTGTTTGTACTGCGTGATGTGGTGAAAAAGCAGCAAGCCCGATGGTTTGAATACACTC TTTGGCTCAGTGCGTTTCTGTTTTTGAGCATTGCGCTGGCGTTTTGGATCCGCATTGTGCACCAGTTGAACGTCAACAAC TTCACTCTGTTTGGCTTTGCTAACCCGCGTTTTCTCAACCAGATCCATATTTGGCTCATCTTCCCTGTCGTTTATCTTGC CGCGATAGCGATGAAACGCGGCAAACGTGGCGTGGTGCCAAGAGCGATCCTCGCGATCGATTTCGCCATTTGTTTTTCAA CCGATGCGCGAGGACCACTGGTGGCCATACTGGGTGGATTCACGCTGCTGATGCTTTGCGCCAGAGATCTGCGCTCTATT TGGTGGAAACTGTTGTGGCAAAGCGCTGTGGTTGGCGCATTGGTGAAACTCGCGCTGCTTTCCCCACTTCCCAGCATGAT TTTTGGTGGGCCGATTGAGTGGCTCAACATTCGAACAGACAGCCCTGGACGCTTAGCGCTGTGGCGACACTCTTGGCAAA TCTTCACCTTTACCGGATTGGGCGGGGATGCGTTTGTCTGTGAAGAGGTCAACCACGGTCGGCCACACAACTCTCTTCTC AACGTGTTGGTGCATTGGGGCGTGGTGTCCGCTCTGTGCTACCTAGCGTTGATCGCCTCACTGTTGCACCTCACCATCAG GCAGCGTTCGTTACGTACTAAGTTGCTTGGCGTCAGCCTGCTCAGCGGCATCGCGTACAGCTTGGTGTCTGGGGTGCTCG ATTCACCTTTAAGTCAACTGATGGCGGTTGTCGCTTGCGCACTGTTTTGGTCACGTTGCTCGCTTGCGTCTGCTTCATTA CCATTGCCAGCCAACAAACCACGCCGATGGTGGGCGCACGGCGTGATACTGATTATCGCTATCGGTTGCAGTGTGTCGGT CGGTTATCGCGCCTTGGAGCGATTGGACAATTATCCGGTTTACCGCAGCGAGGTGATCATCAAAACGCAATTCTGGTTGG GGTATAACTGCTTAGCGAAATCTTGGCAGCCTTAA
Upstream 100 bases:
>100_bases TGGCTGCCAAGCCAAGGGCATTTTTTATAAAAAACCAAGCAAAACCAGTCACTAAGACTAGACTCTAAATATCGCTGATC GTTTTAAAGGGCTCTATGGA
Downstream 100 bases:
>100_bases TGGATTTGCTGGCAAATCACCTCACGTAACCACATGCCCTTTTCGCTGTTGCCAGTGGCGCTATGCCACACCAACGAGAT ATCAAAATCCGCCACCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGL LSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNN FTLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI WWKLLWQSAVVGALVKLALLSPLPSMIFGGPIEWLNIRTDSPGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLL NVLVHWGVVSALCYLALIASLLHLTIRQRSLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASL PLPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP
Sequences:
>Translated_464_residues MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGL LSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNN FTLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI WWKLLWQSAVVGALVKLALLSPLPSMIFGGPIEWLNIRTDSPGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLL NVLVHWGVVSALCYLALIASLLHLTIRQRSLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASL PLPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP >Mature_463_residues TPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGLL SLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNF TLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSIW WKLLWQSAVVGALVKLALLSPLPSMIFGGPIEWLNIRTDSPGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLLN VLVHWGVVSALCYLALIASLLHLTIRQRSLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLP LPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52492; Mature: 52361
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFST CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC QQRQRIIDHWCSLTLLHRGLLSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNFTLFGFANPRFLNQIHIWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH FPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH WWKLLWQSAVVGALVKLALLSPLPSMIFGGPIEWLNIRTDSPGRLALWRHSWQIFTFTGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCEEEEEECEEEEEEECC GGDAFVCEEVNHGRPHNSLLNVLVHWGVVSALCYLALIASLLHLTIRQRSLRTKLLGVSL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLPLPANKPRRWWAHGVILIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHEEE IGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP ECCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCC >Mature Secondary Structure TPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFST CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC QQRQRIIDHWCSLTLLHRGLLSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNFTLFGFANPRFLNQIHIWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH FPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH WWKLLWQSAVVGALVKLALLSPLPSMIFGGPIEWLNIRTDSPGRLALWRHSWQIFTFTGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCEEEEEECEEEEEEECC GGDAFVCEEVNHGRPHNSLLNVLVHWGVVSALCYLALIASLLHLTIRQRSLRTKLLGVSL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLPLPANKPRRWWAHGVILIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHEEE IGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP ECCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA