| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365030
Identifier: 27365030
GI number: 27365030
Start: 1643036
End: 1644757
Strand: Reverse
Name: 27365030
Synonym: VV1_1668
Alternate gene names: NA
Gene position: 1644757-1643036 (Counterclockwise)
Preceding gene: 27365031
Following gene: 27365029
Centisome position: 50.12
GC content: 47.85
Gene sequence:
>1722_bases ATGCTGCTACTCACCAATCACCTAGGCTACGAACTGAGTGGACCCAAACATGCGGTCATTCAAAGTAATAAGTCGCGTTT GTCGTCTTATGCTGCCTTATTGGTGTGCGCCAATGGCCATCAGACCGTGGCATCATTAGAAATCGAGAAAGTGGGCAAAG TCGCCAATTGGCACCAAGGTTACTTTTACACGATTGATTTTTCAGACTTCGACCAAGTCGGCGAGTTCTATATTCGTTTT GATAATCATCGTTCAGCAAACTTCACTATCGGCCAATCGCTGCTGATGCAGCAAACTTTTTCCGATGTACTGCATTACTT TAAATCACAGCGCTGTGGCGGCATTTTTGACCTGCAAGATCGCAACGCACCACTGTTAAACCGTAATAAAACCGTCGATG TACACGGCGGTTGGTACGACGCATCTGGCGACGTGAGCAAATACCTCAGCCATCTTTCGTATGCCAATTATCTCAACCCA CAGCAAACGCCGATGGTGGTTTGGAACATGCTTAAAGGGCTAGAACTGCTCTCTGGTCATGAGATCCTACCCGCCTTCAG CCAAGTACGTTTGAAAGAAGAAGCGCTGCATGGCGCGGATTTCCTCGTCAGAATGCAAGACAGCCAAGGCTTCTTCTATA CCACGGTGTTCGATAAGTGGAGTAAAGACATCAAACAACGCGAGATCTGCTCTTACGAAACTCAGCAAGGTCATAAATCT GATGACTATCAAGCAGGGTTTCGTCAAGGCGGCGGCGTCAGCATCGCAGCGCTAGCGGCCGCCTCTCGTCTCGATGTACA CGGTGAATTTGACCAACAAAAATACCTCAATGCTGCAGAGAATGGTTACTGGCATCTCAAAGAGTACAACCCTCAATACC TCAACGATGGTCAAGAAAACATCATTGATGAGTATTGCGCTCTGCTCGCGGTTGTTGAGCTCTATCGTGCCACTCAAGAA GAGCGTTATCTCGCGGAAAGCCGAATTTGGGCATCACGCTTGTGTACTCGACAGCAAAGTGATGAGCAGTTTGCCCATTA TTGGTCTGCCAATCTGGATGGTTCTCGTCCCTATTTCCACGCAGCGGAAGCAGGCCTACCTGTTATTGCCCTGTGCGAAT ACCTCTCGATTGAACACAACTCTGAACTAATGGAACAAGCGCGAGAAGTCGTGCACCGAGCATGTGAATTTGAGCTCAAC ATTACTCATAAAGTGAATAACCCATTTAGCTACCCAAGACAATATGTCAAAGGCGTAAACGAAAATAAGCGTGATGCGTT TTTTGTCGCGCAAAACAATGAGTCTGGGTACTGGTGGCAAGGTGAGAATGCGCGTTTAGGCTCCATCGCCTCAATGGCTT ACTTGGTGCAACCTCATCTGCAAGATGCTCGCCTCAGTCATGAGATGGCCGTATTGGCTCAGCGCTCACTCGATTGGGTA TTGGGTCTCAACCCTTACGATATGTGTATGCTGGATGGGCATGGTCGTAACAATCCTGACTATTTGCCTCAATTCGGTTT CTTCAACGCCAAAGGGGGCGTCTGTAACGGCATCACTTCAGGCTTTGATGATGAAAACGACATTGCCTTTAATCCTGAAA AACAAAAAGACGACTTATTACAAAACTGGCGCTGGGGAGAGCAATGGATCCCTCATGGGGCTTGGTATCTTCTCGCGATC ATGAGCCAGACACACTACAACTCAGCCACGCTAGGAAAATAA
Upstream 100 bases:
>100_bases TCGTTGTTACCTATTCGAAAACTAAACCTAATTGAGCCAAGGCGTTGCCTTGGCTCTCACTGTTACTACCTATTATTTTG CGACATGTCGGAGATTTGTA
Downstream 100 bases:
>100_bases CATGACGCATTTATACGTAGGAATCGATGGGGGCGGCACTTCTTGCCGAGCACGCATCAAAGATGCTCAAGGGCACTTTA TTGGTGAAGCCAAAAGCGGC
Product: glucosamine-link cellobiase
Products: NA
Alternate protein names: Endoglucanase-Related Protein; Endoglucanase-Like Protein; Chitobiase; Glycoside Hydrolase Family Protein; Endoglucanase; Glucosamine-Link Cellobiase; Beta-Glycosidase-Like Protein; Glycosy Hydrolase Family Protein
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNRNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLDVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCTRQQSDEQFAHYWSANLDGSRPYFHAAEAGLPVIALCEYLSIEHNSELMEQAREVVHRACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFVAQNNESGYWWQGENARLGSIASMAYLVQPHLQDARLSHEMAVLAQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPEKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK
Sequences:
>Translated_573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNRNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLDVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCTRQQSDEQFAHYWSANLDGSRPYFHAAEAGLPVIALCEYLSIEHNSELMEQAREVVHRACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFVAQNNESGYWWQGENARLGSIASMAYLVQPHLQDARLSHEMAVLAQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPEKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK >Mature_573_residues MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQGYFYTIDFSDFDQVGEFYIRF DNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQDRNAPLLNRNKTVDVHGGWYDASGDVSKYLSHLSYANYLNP QQTPMVVWNMLKGLELLSGHEILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS DDYQAGFRQGGGVSIAALAAASRLDVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQENIIDEYCALLAVVELYRATQE ERYLAESRIWASRLCTRQQSDEQFAHYWSANLDGSRPYFHAAEAGLPVIALCEYLSIEHNSELMEQAREVVHRACEFELN ITHKVNNPFSYPRQYVKGVNENKRDAFFVAQNNESGYWWQGENARLGSIASMAYLVQPHLQDARLSHEMAVLAQRSLDWV LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPEKQKDDLLQNWRWGEQWIPHGAWYLLAI MSQTHYNSATLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65534; Mature: 65534
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQG CEEEECCCCEECCCCCEEECCCCHHHHHHHEEEEEECCCCCEEHHEEHHHHHCCCCCCCC YFYTIDFSDFDQVGEFYIRFDNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQD EEEEEECCCHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RNAPLLNRNKTVDVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNMLKGLELLSGH CCCCCCCCCCEEEECCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHCCCCCC DDYQAGFRQGGGVSIAALAAASRLDVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQEN CCHHHHHCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCHHH IIDEYCALLAVVELYRATQEERYLAESRIWASRLCTRQQSDEQFAHYWSANLDGSRPYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEE AAEAGLPVIALCEYLSIEHNSELMEQAREVVHRACEFELNITHKVNNPFSYPRQYVKGVN HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCC ENKRDAFFVAQNNESGYWWQGENARLGSIASMAYLVQPHLQDARLSHEMAVLAQRSLDWV CCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEE LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPEKQKDDLL ECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QNWRWGEQWIPHGAWYLLAIMSQTHYNSATLGK HCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLLLTNHLGYELSGPKHAVIQSNKSRLSSYAALLVCANGHQTVASLEIEKVGKVANWHQG CEEEECCCCEECCCCCEEECCCCHHHHHHHEEEEEECCCCCEEHHEEHHHHHCCCCCCCC YFYTIDFSDFDQVGEFYIRFDNHRSANFTIGQSLLMQQTFSDVLHYFKSQRCGGIFDLQD EEEEEECCCHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC RNAPLLNRNKTVDVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNMLKGLELLSGH CCCCCCCCCCEEEECCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC EILPAFSQVRLKEEALHGADFLVRMQDSQGFFYTTVFDKWSKDIKQREICSYETQQGHKS CHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHCCCCCC DDYQAGFRQGGGVSIAALAAASRLDVHGEFDQQKYLNAAENGYWHLKEYNPQYLNDGQEN CCHHHHHCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHCCCHHH IIDEYCALLAVVELYRATQEERYLAESRIWASRLCTRQQSDEQFAHYWSANLDGSRPYFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEE AAEAGLPVIALCEYLSIEHNSELMEQAREVVHRACEFELNITHKVNNPFSYPRQYVKGVN HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHCCC ENKRDAFFVAQNNESGYWWQGENARLGSIASMAYLVQPHLQDARLSHEMAVLAQRSLDWV CCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEE LGLNPYDMCMLDGHGRNNPDYLPQFGFFNAKGGVCNGITSGFDDENDIAFNPEKQKDDLL ECCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QNWRWGEQWIPHGAWYLLAIMSQTHYNSATLGK HCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA