Click here to switch to the map view.

The map label for this gene is 27364906

Identifier: 27364906

GI number: 27364906

Start: 1506766

End: 1507560

Strand: Reverse

Name: 27364906

Synonym: VV1_1535

Alternate gene names: NA

Gene position: 1507560-1506766 (Counterclockwise)

Preceding gene: 27364907

Following gene: 27364905

Centisome position: 45.94

GC content: 49.69

Gene sequence:

>795_bases
ATGCCTCGTACCGTAGACCCGTCGGATCTGGAGCAAAAACGAAAGGACGTTCCCGATCACGAATACGCTCGCACTATTCC
ATGTAACCAACTCAGTGTGTCCGCCCCGTTTCACTGGCTAGCACTTGGCTTGCATGACTTCATTCGAATGCCACTTATCA
GCGCCTTTTATGGCTTATGCTTCATGGCTGCCGCCATAGGTATTGTGTTGCTGGTTGAGTGGCAAGGGACTCATTTGGTG
GTAATGCCCAGCTTGGTGGTATACATGCTCATCGGCCCATTTCTTGCGCTTGGTTTGTATGATGCCAGTTGGGAAAGAGA
ACGCGGCCATAGCGCCAGCCTACTCCACTCAATGAAAGCCATTGGCCGCAACTCTTCTTCTCAATGGGCCTTTGCGGTGC
TGTTAGCGGTGTGCATGATTTTCTGGATGCGCATTGCCGCTTTACTCCATGCCCTCTACCCTTCTGTGCAAGGAGCACCA
CTCACAGAGTTTCTTCCTTTCTTAGTGATTGGTTCACTCGTTGGTTTCGTCTTGGCCAGTATCGTCTTTAGCATTTCTGC
GTTTTCGATTCCGATGATGATGGAACGCCGAGTCGATATGATGACAGCGGTTTTCAGCAGCTTTAATGCCGTGAAGTCCA
ACATTCCGACAATGATTGTTTGGGCAGCCATTATTTGTGGCGGCATTCTAATTGGCTTTGCCACTTATGGCATTGGTATG
CTCTTCACCATGCCGATACTTGGCTACGCCACTTGGCACGCCTACCATGAAACCATCAAGAAAAAACACCACTAG

Upstream 100 bases:

>100_bases
ACAAAACAGATGCTAAAGGTAATAAAAGAGATCTTGCCCCGCACCTGAAACCTACTGACAGTCAACGTCAGTCTGACAGT
GAATCGATCAAGGAGGAGCT

Downstream 100 bases:

>100_bases
GGTCTTTGCCCCTAGAAGCATCAACAGATAATGCTATTATTTGCCCTCATCACACCATGAGGGCAAATTTTTGATGAAAA
AGATCGAGTTTGAGCTGCAC

Product: putative cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPRTVDPSDLEQKRKDVPDHEYARTIPCNQLSVSAPFHWLALGLHDFIRMPLISAFYGLCFMAAAIGIVLLVEWQGTHLV
VMPSLVVYMLIGPFLALGLYDASWERERGHSASLLHSMKAIGRNSSSQWAFAVLLAVCMIFWMRIAALLHALYPSVQGAP
LTEFLPFLVIGSLVGFVLASIVFSISAFSIPMMMERRVDMMTAVFSSFNAVKSNIPTMIVWAAIICGGILIGFATYGIGM
LFTMPILGYATWHAYHETIKKKHH

Sequences:

>Translated_264_residues
MPRTVDPSDLEQKRKDVPDHEYARTIPCNQLSVSAPFHWLALGLHDFIRMPLISAFYGLCFMAAAIGIVLLVEWQGTHLV
VMPSLVVYMLIGPFLALGLYDASWERERGHSASLLHSMKAIGRNSSSQWAFAVLLAVCMIFWMRIAALLHALYPSVQGAP
LTEFLPFLVIGSLVGFVLASIVFSISAFSIPMMMERRVDMMTAVFSSFNAVKSNIPTMIVWAAIICGGILIGFATYGIGM
LFTMPILGYATWHAYHETIKKKHH
>Mature_263_residues
PRTVDPSDLEQKRKDVPDHEYARTIPCNQLSVSAPFHWLALGLHDFIRMPLISAFYGLCFMAAAIGIVLLVEWQGTHLVV
MPSLVVYMLIGPFLALGLYDASWERERGHSASLLHSMKAIGRNSSSQWAFAVLLAVCMIFWMRIAALLHALYPSVQGAPL
TEFLPFLVIGSLVGFVLASIVFSISAFSIPMMMERRVDMMTAVFSSFNAVKSNIPTMIVWAAIICGGILIGFATYGIGML
FTMPILGYATWHAYHETIKKKHH

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29352; Mature: 29221

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTVDPSDLEQKRKDVPDHEYARTIPCNQLSVSAPFHWLALGLHDFIRMPLISAFYGLC
CCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMAAAIGIVLLVEWQGTHLVVMPSLVVYMLIGPFLALGLYDASWERERGHSASLLHSMKA
HHHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
IGRNSSSQWAFAVLLAVCMIFWMRIAALLHALYPSVQGAPLTEFLPFLVIGSLVGFVLAS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVFSISAFSIPMMMERRVDMMTAVFSSFNAVKSNIPTMIVWAAIICGGILIGFATYGIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFTMPILGYATWHAYHETIKKKHH
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRTVDPSDLEQKRKDVPDHEYARTIPCNQLSVSAPFHWLALGLHDFIRMPLISAFYGLC
CCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMAAAIGIVLLVEWQGTHLVVMPSLVVYMLIGPFLALGLYDASWERERGHSASLLHSMKA
HHHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
IGRNSSSQWAFAVLLAVCMIFWMRIAALLHALYPSVQGAPLTEFLPFLVIGSLVGFVLAS
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVFSISAFSIPMMMERRVDMMTAVFSSFNAVKSNIPTMIVWAAIICGGILIGFATYGIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFTMPILGYATWHAYHETIKKKHH
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA