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The map label for this gene is 27364863

Identifier: 27364863

GI number: 27364863

Start: 1468119

End: 1468595

Strand: Reverse

Name: 27364863

Synonym: VV1_1479

Alternate gene names: NA

Gene position: 1468595-1468119 (Counterclockwise)

Preceding gene: 27364865

Following gene: 27364860

Centisome position: 44.75

GC content: 45.7

Gene sequence:

>477_bases
ATGATGACTACTACAACATTACCGCCTGCTGGGCTTTTTCGTCGCCTTGCGGCACTTTTTTATGACGCTTTGATTATTAT
TGCTTTAGAAATGATGGCAGCCGGGGTCGTGATGGCCATACTGTTTGCCCTAAATGGGATGGGCTTGATCAGTTATGGCG
AATATGTGGATGCCGCTGATTTACTCAGCCGACACCCAATCATCAGCCCGCTCTTTACTTTCTATCTTGCCGCTGTCTGG
ATCTACTTCTTAGTCTATTTTTGGACTCGAGCAGGCCAAACACTTGGAATGCGAGCATGGAAGATTCAAGTACGTAATCA
CGACGGTTCGATGATTACTCCAACTCAAGCTCTAATACGCATTGCAACTTCTGCGTTTGGTTTGGCAAATTTCACTGTGC
CAATCGATCCGAAGAAAAGGGGCTTTCACGACATTTGGGCCAAAACAGAAGTCGTTTTGCTGCCTAAAGTCAGATAA

Upstream 100 bases:

>100_bases
CCTAAGTTTTCGCCACAAATGAACACAGTGTGCTCTAGCTCTCTTTTCTTCATAGGGTTGAATCTATATCCTGACGCACA
ATTTGAAAGGTAAGTGAACG

Downstream 100 bases:

>100_bases
TCCCAAGCTAAACAATCTAGGCGCTCGAGTTAAAGAGACCATAAAAAATGGAAGGCATATTGCCTTCCATCTTCTTTTCT
TTCGCGAGTCAATCCCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; Proline-Rich Antigen; RDD Family

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MMTTTTLPPAGLFRRLAALFYDALIIIALEMMAAGVVMAILFALNGMGLISYGEYVDAADLLSRHPIISPLFTFYLAAVW
IYFLVYFWTRAGQTLGMRAWKIQVRNHDGSMITPTQALIRIATSAFGLANFTVPIDPKKRGFHDIWAKTEVVLLPKVR

Sequences:

>Translated_158_residues
MMTTTTLPPAGLFRRLAALFYDALIIIALEMMAAGVVMAILFALNGMGLISYGEYVDAADLLSRHPIISPLFTFYLAAVW
IYFLVYFWTRAGQTLGMRAWKIQVRNHDGSMITPTQALIRIATSAFGLANFTVPIDPKKRGFHDIWAKTEVVLLPKVR
>Mature_158_residues
MMTTTTLPPAGLFRRLAALFYDALIIIALEMMAAGVVMAILFALNGMGLISYGEYVDAADLLSRHPIISPLFTFYLAAVW
IYFLVYFWTRAGQTLGMRAWKIQVRNHDGSMITPTQALIRIATSAFGLANFTVPIDPKKRGFHDIWAKTEVVLLPKVR

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17669; Mature: 17669

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTTTLPPAGLFRRLAALFYDALIIIALEMMAAGVVMAILFALNGMGLISYGEYVDAAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LLSRHPIISPLFTFYLAAVWIYFLVYFWTRAGQTLGMRAWKIQVRNHDGSMITPTQALIR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECHHHHHHH
IATSAFGLANFTVPIDPKKRGFHDIWAKTEVVLLPKVR
HHHHHHHHCEEEEECCCCCCCHHHHHCCCEEEECCCCC
>Mature Secondary Structure
MMTTTTLPPAGLFRRLAALFYDALIIIALEMMAAGVVMAILFALNGMGLISYGEYVDAAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LLSRHPIISPLFTFYLAAVWIYFLVYFWTRAGQTLGMRAWKIQVRNHDGSMITPTQALIR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECHHHHHHH
IATSAFGLANFTVPIDPKKRGFHDIWAKTEVVLLPKVR
HHHHHHHHCEEEEECCCCCCCHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA