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The map label for this gene is gpsA [H]

Identifier: 27364678

GI number: 27364678

Start: 1262062

End: 1263099

Strand: Reverse

Name: gpsA [H]

Synonym: VV1_1277

Alternate gene names: 27364678

Gene position: 1263099-1262062 (Counterclockwise)

Preceding gene: 27364679

Following gene: 27364677

Centisome position: 38.49

GC content: 51.35

Gene sequence:

>1038_bases
ATGACTCAAACACTGGTTAATAACGCCTACGGCAAAGAGATTTCAATGACTGTGATCGGCGCAGGTTCGTACGGCACATC
ATTAGCAATCTCACTTTCACGTAACGGTGCCAACGTTGTCCTTTGGGGACATGAACCAGAGCATATGGCTAAGCTCGAGG
CGGATCGCGCAAACCACGAATTCCTGCCCGGTATTGAGTTCCCACCGAGCCTGATTGTGGAATCCGATTTAGCAAAAGCC
GTGCAAGCGAGCCGAGATCTGTTGGTTGTCGTACCAAGCCATGTGTTTGGTATTGTGCTCAATAGCTTAAAACCCTATCT
GCGTGATGATTCTCGTATCTGCTGGGCCACCAAAGGTCTTGAACCTGAAACCGGTCGCCTTCTAAAAGACGTCGCGTTTG
ATGTACTGGGTGAACACTACTCGTTGGCCGTGTTGTCAGGCCCAACCTTTGCCAAAGAGCTGGCTGCAGGCATGCCAACT
GCGATTTCAGTCGCCTCACCAGATGCGCAGTTTGTCGCAGACCTACAGGAAAAAATCCACTGCAGCAAAACCTTCCGTGT
TTATGCCAACAGTGATTTCACTGGCATGCAACTCGGTGGCGCGGTGAAAAACGTCATCGCCATTGGTGCAGGGATGTCTG
ACGGAATTGGCTTCGGTGCCAATGCTCGTACCGCATTAATCACTCGTGGTTTGGCGGAAATGTGTCGTTTGGGGGCTGCG
CTTGGAGCACAACCAGAAACCTTTATGGGCATGGCAGGTTTGGGCGATCTGGTGCTGACGTGTACCGACAACCAATCACG
TAACCGCCGCTTTGGTCTTGCACTTGGGCAAGGAAAAGACGTCGATACGGCGCAAGCGGATATTGGCCAAGTGGTCGAAG
GCTACCGCAACACCAAAGAGGTGTGGATGCTGGCACAACGTATGGGCGTTGAGATGCCTATTGTTGACCAAATCTATCAA
GTATTATATCAAGGAAAGGATGCGCGCCTGGCAGCGCAAGATCTGCTGGCTCGCGATAAGAAATCCGAAGGAAAATAA

Upstream 100 bases:

>100_bases
GCATTTTTTATTGGATCTAACTTAGGTAAGCGATACCCAAGCTCGCTTTAATGAGGGTATACTCTGCCAATCATCATGAA
ACCAACCATCAGGTAAACGC

Downstream 100 bases:

>100_bases
GGACACTTTGGCCCCATTCCAAAGTAGTGAGAATACGCCATGAAACACTGTGAAAAACAAAAAGTCTGGCAGAGCATTGT
CAAAGAAGCCCGTGAGCTAT

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTQTLVNNAYGKEISMTVIGAGSYGTSLAISLSRNGANVVLWGHEPEHMAKLEADRANHEFLPGIEFPPSLIVESDLAKA
VQASRDLLVVVPSHVFGIVLNSLKPYLRDDSRICWATKGLEPETGRLLKDVAFDVLGEHYSLAVLSGPTFAKELAAGMPT
AISVASPDAQFVADLQEKIHCSKTFRVYANSDFTGMQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMCRLGAA
LGAQPETFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKDVDTAQADIGQVVEGYRNTKEVWMLAQRMGVEMPIVDQIYQ
VLYQGKDARLAAQDLLARDKKSEGK

Sequences:

>Translated_345_residues
MTQTLVNNAYGKEISMTVIGAGSYGTSLAISLSRNGANVVLWGHEPEHMAKLEADRANHEFLPGIEFPPSLIVESDLAKA
VQASRDLLVVVPSHVFGIVLNSLKPYLRDDSRICWATKGLEPETGRLLKDVAFDVLGEHYSLAVLSGPTFAKELAAGMPT
AISVASPDAQFVADLQEKIHCSKTFRVYANSDFTGMQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMCRLGAA
LGAQPETFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKDVDTAQADIGQVVEGYRNTKEVWMLAQRMGVEMPIVDQIYQ
VLYQGKDARLAAQDLLARDKKSEGK
>Mature_344_residues
TQTLVNNAYGKEISMTVIGAGSYGTSLAISLSRNGANVVLWGHEPEHMAKLEADRANHEFLPGIEFPPSLIVESDLAKAV
QASRDLLVVVPSHVFGIVLNSLKPYLRDDSRICWATKGLEPETGRLLKDVAFDVLGEHYSLAVLSGPTFAKELAAGMPTA
ISVASPDAQFVADLQEKIHCSKTFRVYANSDFTGMQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMCRLGAAL
GAQPETFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKDVDTAQADIGQVVEGYRNTKEVWMLAQRMGVEMPIVDQIYQV
LYQGKDARLAAQDLLARDKKSEGK

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=337, Percent_Identity=27.299703264095, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI24307999, Length=335, Percent_Identity=25.3731343283582, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1790037, Length=332, Percent_Identity=73.1927710843374, Blast_Score=495, Evalue=1e-141,
Organism=Caenorhabditis elegans, GI32564399, Length=329, Percent_Identity=24.6200607902736, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193210136, Length=338, Percent_Identity=24.2603550295858, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32564403, Length=338, Percent_Identity=24.2603550295858, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17507425, Length=347, Percent_Identity=23.342939481268, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193210134, Length=187, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324513, Length=346, Percent_Identity=25.1445086705202, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320181, Length=344, Percent_Identity=27.0348837209302, Blast_Score=101, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17136204, Length=345, Percent_Identity=25.2173913043478, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136200, Length=345, Percent_Identity=25.2173913043478, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136202, Length=345, Percent_Identity=25.2173913043478, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI22026922, Length=329, Percent_Identity=23.1003039513678, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281362270, Length=264, Percent_Identity=25.7575757575758, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45551945, Length=264, Percent_Identity=25.7575757575758, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648969, Length=209, Percent_Identity=26.7942583732057, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 36961; Mature: 36830

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTLVNNAYGKEISMTVIGAGSYGTSLAISLSRNGANVVLWGHEPEHMAKLEADRANHE
CCCCHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCCC
FLPGIEFPPSLIVESDLAKAVQASRDLLVVVPSHVFGIVLNSLKPYLRDDSRICWATKGL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCC
EPETGRLLKDVAFDVLGEHYSLAVLSGPTFAKELAAGMPTAISVASPDAQFVADLQEKIH
CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
CSKTFRVYANSDFTGMQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMCRLGAA
HCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LGAQPETFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKDVDTAQADIGQVVEGYRNTKE
HCCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHH
VWMLAQRMGVEMPIVDQIYQVLYQGKDARLAAQDLLARDKKSEGK
HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TQTLVNNAYGKEISMTVIGAGSYGTSLAISLSRNGANVVLWGHEPEHMAKLEADRANHE
CCCHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCCC
FLPGIEFPPSLIVESDLAKAVQASRDLLVVVPSHVFGIVLNSLKPYLRDDSRICWATKGL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCC
EPETGRLLKDVAFDVLGEHYSLAVLSGPTFAKELAAGMPTAISVASPDAQFVADLQEKIH
CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
CSKTFRVYANSDFTGMQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMCRLGAA
HCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LGAQPETFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKDVDTAQADIGQVVEGYRNTKE
HCCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHH
VWMLAQRMGVEMPIVDQIYQVLYQGKDARLAAQDLLARDKKSEGK
HHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA