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The map label for this gene is yjcG [C]

Identifier: 27364644

GI number: 27364644

Start: 1227133

End: 1228836

Strand: Reverse

Name: yjcG [C]

Synonym: VV1_1243

Alternate gene names: 27364644

Gene position: 1228836-1227133 (Counterclockwise)

Preceding gene: 27364645

Following gene: 326423813

Centisome position: 37.44

GC content: 50.53

Gene sequence:

>1704_bases
ATGGATATTCAAACTTGGACGTTTATTCTTGTCGGTATCACTTTTGCTCTGTATATCGGCATCGCAATCTGGGCCCGTGC
GGGATCAACCAGTGAATTCTATGTTGCTGGCGGTGGTGTTCACCCAGTCGCCAACGGCATGGCAACCGCAGCGGACTGGA
TGTCTGCGGCATCATTTATCTCTATGGCAGGTATTATCTCGTTCATCGGCTACGATGGTACGGTATACCTGATGGGTTGG
ACCGGTGGCTACGTACTTCTCGCCCTTTGTTTAGCCCCTTATCTACGTAAGTTTGGTAAGTTCACCGTGCCAGATTTCAT
CGGCGACCGTTACTACTCAAGAACGGCGCGTTTGGTTGCGGTATTCTGTGCTATTTTCGTATCGTTTACTTACGTTGCTG
GTCAAATGCGTGGTGTGGGTGTGGTATTCGCACGCTTCCTCGAAGTTGACATCAACATGGGTATCATCATCGGTATGGCG
ATCGTGTTCTTCTACGCGGTTATGGGCGGCATGAAGGGCATCACCTATACGCAGGTAGCGCAATACTGTGTGCTTATCTT
TGCCTTCATGGTTCCAGCGATCTTCACTTCCTTGATGATGACTGGTAACCCTGTCCCTCAGCTTGGCTTCGGTTCGACCA
TGGCAGGTAGCGATGAGTATCTACTCACCAAACTGGATGGTCTAACACAGGAGCTCGGTTTCACCGCCTATACCGATGGA
TCGAAGAGCATGGTTGACGTCTTCTTCATCTGTGCGGCGCTCATGGTAGGTACTGCCGGTCTTCCACATGTTATTATTCG
CTTCTTTACCGTACCGAAAGTATCTGATGCGCGTATCTCTGCTGGTTGGGCATTGGTGTTCATCGCGATTCTTTATACCA
CCGCACCGGCTGTGGCAGCGTTTGCACGCGTTAACATGATCGACACCATCAATGGTCCAGACATGCAAGGTGTCGCAGGC
ACAGAAGCACCGAGCTGGTACAAAAACTGGGAAAGCACTGGCCTAGTGGCTTGGGAAGACAAGAATGGCGATGGCAAGAT
GTTCTACTCTGGCGATGAGCGCAACGAGATGAAGATCAACCGCGATATCATCGTACTGGCTTCTCCAGAACTAGCAAAAC
TACCAAACTGGGTTGTGGCACTATTGGCAGCGGGTGGTCTGGCAGCAGCACTCTCTACCGCAGCAGGCCTACTATTGGTT
ATCTCAACCGCCATTTCGCATGACTTGTTGAAGAAAGGCTTTAGGCCCAATATGACCGATAAACAGGAGTTAATGGCCGC
GCGGATTGCGTCAGCGATTGCCATCGTCGGTGCGGGCTACTTGGGTATTAACCCTCCAGGCTTTGTAGCACAGGTTGTGG
CATTCGCCTTCGGATTGGCAGCCTCATCCTTCTTCCCTGCGATTATCTTGGGTATCTTCTATAAGAAGATGAACAAAGAA
GGCGCTATCACGGGTATGTTGGCAGGTATTACCTTTACTGCGGCTTACATCGTGTACTTCAAGTTCATTAACCCAGCTGC
GAGCACACCGGATAACTGGTTGTTCGGTATCAGCCCTGAGGGCATTGGTACACTAGGTATGTGTCTGAACTTTGTGGTAG
CAATTGTCGTGAACAAGTTCACTGCCGAAGTACCGTCAGATGTACAAGAAATGGTTGAGTCTATCCGCTACCCGAAAGGC
GCTGGCGCAGCTCACGACCATTGA

Upstream 100 bases:

>100_bases
GTCGATCTACACCTTTGTGGCGCTGATCTTTGTCTACGTTGTCCGCATGAATGCGCTGGACAAGAAGTACAACGTGCAGG
AAGACTAAGAGGTTTAGGAA

Downstream 100 bases:

>100_bases
TCCACACTTTAGAGCTTTATTGTAGGGATTGAGCTCCGAGGAAAAGCAAAGCCGATGCAACTGCATCGGCTTTTTGTTGT
GCACAAAGTATCAAACTTAT

Product: sodium:solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFIGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARLVAVFCAIFVSFTYVAGQMRGVGVVFARFLEVDINMGIIIGMA
IVFFYAVMGGMKGITYTQVAQYCVLIFAFMVPAIFTSLMMTGNPVPQLGFGSTMAGSDEYLLTKLDGLTQELGFTAYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARISAGWALVFIAILYTTAPAVAAFARVNMIDTINGPDMQGVAG
TEAPSWYKNWESTGLVAWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTAISHDLLKKGFRPNMTDKQELMAARIASAIAIVGAGYLGINPPGFVAQVVAFAFGLAASSFFPAIILGIFYKKMNKE
GAITGMLAGITFTAAYIVYFKFINPAASTPDNWLFGISPEGIGTLGMCLNFVVAIVVNKFTAEVPSDVQEMVESIRYPKG
AGAAHDH

Sequences:

>Translated_567_residues
MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFIGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARLVAVFCAIFVSFTYVAGQMRGVGVVFARFLEVDINMGIIIGMA
IVFFYAVMGGMKGITYTQVAQYCVLIFAFMVPAIFTSLMMTGNPVPQLGFGSTMAGSDEYLLTKLDGLTQELGFTAYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARISAGWALVFIAILYTTAPAVAAFARVNMIDTINGPDMQGVAG
TEAPSWYKNWESTGLVAWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTAISHDLLKKGFRPNMTDKQELMAARIASAIAIVGAGYLGINPPGFVAQVVAFAFGLAASSFFPAIILGIFYKKMNKE
GAITGMLAGITFTAAYIVYFKFINPAASTPDNWLFGISPEGIGTLGMCLNFVVAIVVNKFTAEVPSDVQEMVESIRYPKG
AGAAHDH
>Mature_567_residues
MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFIGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARLVAVFCAIFVSFTYVAGQMRGVGVVFARFLEVDINMGIIIGMA
IVFFYAVMGGMKGITYTQVAQYCVLIFAFMVPAIFTSLMMTGNPVPQLGFGSTMAGSDEYLLTKLDGLTQELGFTAYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARISAGWALVFIAILYTTAPAVAAFARVNMIDTINGPDMQGVAG
TEAPSWYKNWESTGLVAWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTAISHDLLKKGFRPNMTDKQELMAARIASAIAIVGAGYLGINPPGFVAQVVAFAFGLAASSFFPAIILGIFYKKMNKE
GAITGMLAGITFTAAYIVYFKFINPAASTPDNWLFGISPEGIGTLGMCLNFVVAIVVNKFTAEVPSDVQEMVESIRYPKG
AGAAHDH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=491, Percent_Identity=26.4765784114053, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1787251, Length=497, Percent_Identity=21.5291750503018, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 60649; Mature: 60649

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH
SMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARLVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFARFLEVDINMGIIIGMAIVFFYAVMGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QYCVLIFAFMVPAIFTSLMMTGNPVPQLGFGSTMAGSDEYLLTKLDGLTQELGFTAYTDG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCC
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARISAGWALVFIAILYTTAPAVAA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHH
FARVNMIDTINGPDMQGVAGTEAPSWYKNWESTGLVAWEDKNGDGKMFYSGDERNEMKIN
HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEECCCCCCCEEEC
RDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFRPNMTD
CCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELMAARIASAIAIVGAGYLGINPPGFVAQVVAFAFGLAASSFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAITGMLAGITFTAAYIVYFKFINPAASTPDNWLFGISPEGIGTLGMCLNFVVAIVVNKF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
TAEVPSDVQEMVESIRYPKGAGAAHDH
HHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH
SMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARLVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFARFLEVDINMGIIIGMAIVFFYAVMGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QYCVLIFAFMVPAIFTSLMMTGNPVPQLGFGSTMAGSDEYLLTKLDGLTQELGFTAYTDG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCC
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARISAGWALVFIAILYTTAPAVAA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHH
FARVNMIDTINGPDMQGVAGTEAPSWYKNWESTGLVAWEDKNGDGKMFYSGDERNEMKIN
HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEECCCCCCCEEEC
RDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFRPNMTD
CCEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELMAARIASAIAIVGAGYLGINPPGFVAQVVAFAFGLAASSFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAITGMLAGITFTAAYIVYFKFINPAASTPDNWLFGISPEGIGTLGMCLNFVVAIVVNKF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
TAEVPSDVQEMVESIRYPKGAGAAHDH
HHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]