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The map label for this gene is cyaY

Identifier: 27364545

GI number: 27364545

Start: 1125952

End: 1126266

Strand: Reverse

Name: cyaY

Synonym: VV1_1124

Alternate gene names: 27364545

Gene position: 1126266-1125952 (Counterclockwise)

Preceding gene: 27364552

Following gene: 27364543

Centisome position: 34.32

GC content: 45.71

Gene sequence:

>315_bases
ATGAACAATACTGAATTTCATCAACTAGTGGATAACGAGCTACAACTCATTGAAGAAGCGATTGATGAATCAGGCGCAGA
CATCGATTACGAAACCACGGGCAACGTGATGACGTTAGAATTTGATGACCGCAGCCAAATCATCATCAATCGCCAAGAGC
CGATGCAAGAAATTTGGTTAGCCTCGAAATCCGGCGGTTTCCACTTCCAATACAAAGCGGGTCAGTGGATTTGCTCCAAG
ACTGGCGTTGAGTTTGCACACATGGTCAAACAAGAGTGTGAAAAGCACGCGGGTGAATCGATCGATTGGGCTTAA

Upstream 100 bases:

>100_bases
ACAGCACAGTAAGTATTTTTTTCATTTTGCATATCGTGATTATTGATTCAATGCCCCCTATAATCGCACCACACTCAGGA
AAAGCAATAGGATAGATAGG

Downstream 100 bases:

>100_bases
ACCAACGTCGTCTCACACCAGCAACGCACAAACACAAAGAGCACCTTTCGGTGCTCTTTGTGTTTCGAGTAGACTAAAAC
GCGTAGCTATCGTTAAGCCA

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNNTEFHQLVDNELQLIEEAIDESGADIDYETTGNVMTLEFDDRSQIIINRQEPMQEIWLASKSGGFHFQYKAGQWICSK
TGVEFAHMVKQECEKHAGESIDWA

Sequences:

>Translated_104_residues
MNNTEFHQLVDNELQLIEEAIDESGADIDYETTGNVMTLEFDDRSQIIINRQEPMQEIWLASKSGGFHFQYKAGQWICSK
TGVEFAHMVKQECEKHAGESIDWA
>Mature_104_residues
MNNTEFHQLVDNELQLIEEAIDESGADIDYETTGNVMTLEFDDRSQIIINRQEPMQEIWLASKSGGFHFQYKAGQWICSK
TGVEFAHMVKQECEKHAGESIDWA

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=103, Percent_Identity=43.6893203883495, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_VIBVU (Q8DD83)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760073.1
- ProteinModelPortal:   Q8DD83
- SMR:   Q8DD83
- GeneID:   1178055
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1124
- HOGENOM:   HBG687517
- OMA:   EPLHQIW
- ProtClustDB:   PRK00446
- BioCyc:   VVUL216895:VV1_1124-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 11954; Mature: 11954

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTEFHQLVDNELQLIEEAIDESGADIDYETTGNVMTLEFDDRSQIIINRQEPMQEIWL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCEEEEECCCHHHHHHH
ASKSGGFHFQYKAGQWICSKTGVEFAHMVKQECEKHAGESIDWA
HCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNTEFHQLVDNELQLIEEAIDESGADIDYETTGNVMTLEFDDRSQIIINRQEPMQEIWL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCEEEEECCCHHHHHHH
ASKSGGFHFQYKAGQWICSKTGVEFAHMVKQECEKHAGESIDWA
HCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA