| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is ilvA [H]
Identifier: 27364461
GI number: 27364461
Start: 1029727
End: 1031256
Strand: Reverse
Name: ilvA [H]
Synonym: VV1_1028
Alternate gene names: 27364461
Gene position: 1031256-1029727 (Counterclockwise)
Preceding gene: 27364462
Following gene: 27364459
Centisome position: 31.42
GC content: 52.88
Gene sequence:
>1530_bases ATGTCATTAACCCAACAAACTGGCGCAGACTACCTGCGCCAGATACTACGCGCTCCTGTGTATGAAGTGGCGACCGTCAC CCCCTTGCAAGAGATGCCGCGTTTGTCCGCACGTATTGGCAACAATGTGCAGATCAAACGTGAAGACCGCCAGCCGGTGC ATTCGTTTAAATTACGTGGCGCTTACAATATGGTGGCCAATCTGTCGCAAGCACAGAAGGACGCGGGGGTGATTACTGCC TCTGCGGGCAACCATGCGCAAGGCATGGCTCTGTCAGGCACACGCCTTGGCATTGAAACCACCATCGTGATGCCTCGCAC GACGCCAGATATCAAAGTCGACGCAGTGCGCGGCTTTGGCGGCAAAGTCGTCTTGCACGGCAGCAACTTCGATGAAGCCA AAGCCGAAGCCGAGCGTCTTTCGCAAGAGAAAGGCTACACTTTTGTCCCGCCTTTCGATCATCCTTTAGTGATTGCTGGG CAAGGCACCATCGGCATGGAAATGCTGCAGCAAAACGGCCATCTCGACCACATTTTCGTCCCTGTTGGGGGCGGTGGCTT AGCCGCTGGTGTGGCGGTGTTGGTGAAACAGCTGATGCCAGAGATCAAAGTCATTGCGGTGGAACCTGAAGATTCTGCCT GCCTTAAGGCGGCATTGGATGCTGGTGAGCCTGTGGTGCTGGATCAAGTCAGTATGTTTGCTGATGGTGTGGCGGTAAAA CGCATTGGCGATGAAACTTTCCGTCTATGCCAGCACTACATTGACGATCACGTCACCGTCTCCAGTGATGAAATCTGCGC GGCGGTCAAAGATATTTTCGAAGACACCCGTGCGATTGCTGAGCCTTCCGGAGCACTGGCGCTGGCGGGGCTGAAAAAGT ATGCCGAGAAACACAAACTCAAAGGACACAACTTGGGTACCGTGCTTTCGGGTGCCAATACCAACTTCCACGGTTTACGT TATGTTTCCGAGCGCTGTGAGCTAGGTGAAAAACGCGAAGGCTTACTTGCGGTGACCATTCCAGAGCGCAAAGGGGCGTT TTTTGAGTTCTGCCATTTGATTGGTGGCCGTGCGGTGACGGAGTTCAACTACCGTTACAACGACGACTCGCTGGCCAATA TTTTTGTCGGCGTTCGTCTGCAAAATGGTCAAGAGGAGTTGGATGGTATCATTCGCGACTTACGCGAAGGCGGCTACCCA GTGGTGGACCTTTCTGAGGATGAAATGGCCAAGCTGCACGTACGCTATATGATTGGCGGTAAACCCTCCAAACCACTCAA AGAGCGCTTATACAGCTTTGAGTTTCCAGAATACCCAGGCGCGCTGCTTAAGTTCCTGAGCACGCTGGGCACACACTGGA ACATTAGCCTGTTTAACTACCGCAACCATGGAGCCGATTATGGCCGCGTACTGTGTGGTTTTGAGCTTGATGAGAGTGAT TTATCCCGCTTTTCGGCGCATTTGCGCGAACTTGGCTACCAATGCAAAGATGTCACGGATAACCCATCCTACCGTTTCTT TCTTTCCTAA
Upstream 100 bases:
>100_bases CCAACGCGAAGTGTCGTTTGCACTGAAAGCCTACGCCAGCATGGCAACCAGTGCCGACAAAGGTGCGGTAAGAGACAAGT CAAAGCTTGAGGGCTAAGCA
Downstream 100 bases:
>100_bases TGCTGTTAAAAACGCCCTGTCAGACAGGGCGTTTTGTTTCGCTCAGCAACCAATCTTGATGCAGTTGATGTGAGTTTCCT AAGTAGTCCACCATCCACTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVITA SAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYP VVDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD LSRFSAHLRELGYQCKDVTDNPSYRFFLS
Sequences:
>Translated_509_residues MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVITA SAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYP VVDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD LSRFSAHLRELGYQCKDVTDNPSYRFFLS >Mature_508_residues SLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVITAS AGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQ GTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVKR IGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLRY VSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPV VDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESDL SRFSAHLRELGYQCKDVTDNPSYRFFLS
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=296, Percent_Identity=34.7972972972973, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI33469958, Length=314, Percent_Identity=28.9808917197452, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI19923959, Length=273, Percent_Identity=32.2344322344322, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1790207, Length=502, Percent_Identity=71.1155378486056, Blast_Score=724, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=295, Percent_Identity=37.6271186440678, Blast_Score=179, Evalue=3e-46, Organism=Caenorhabditis elegans, GI71991565, Length=329, Percent_Identity=33.7386018237082, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17537387, Length=321, Percent_Identity=34.8909657320872, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17508781, Length=261, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320930, Length=521, Percent_Identity=48.3685220729367, Blast_Score=466, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=36.1842105263158, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6319788, Length=264, Percent_Identity=26.1363636363636, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355833, Length=315, Percent_Identity=34.6031746031746, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24645328, Length=251, Percent_Identity=32.6693227091633, Blast_Score=108, Evalue=7e-24,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55990; Mature: 55859
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRG CCCCHHCCHHHHHHHHHCCHHHHHCCCCHHHCCHHHHHCCCCEEEEECCCCCCHHEECCC AYNMVANLSQAQKDAGVITASAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFG HHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEECCC GKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDHIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKL HCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC KGHNLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVT CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEE EFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPVVDLSEDEMAKLHVRYMIGG EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHEEEEEEEECC KPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCHHH LSRFSAHLRELGYQCKDVTDNPSYRFFLS HHHHHHHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure SLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRG CCCHHCCHHHHHHHHHCCHHHHHCCCCHHHCCHHHHHCCCCEEEEECCCCCCHHEECCC AYNMVANLSQAQKDAGVITASAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFG HHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEECCC GKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDHIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKL HCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC KGHNLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVT CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEE EFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPVVDLSEDEMAKLHVRYMIGG EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHEEEEEEEECC KPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCHHH LSRFSAHLRELGYQCKDVTDNPSYRFFLS HHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]