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The map label for this gene is mcp4 [H]

Identifier: 27364275

GI number: 27364275

Start: 833656

End: 835323

Strand: Reverse

Name: mcp4 [H]

Synonym: VV1_0826

Alternate gene names: 27364275

Gene position: 835323-833656 (Counterclockwise)

Preceding gene: 27364279

Following gene: 326423775

Centisome position: 25.45

GC content: 48.74

Gene sequence:

>1668_bases
ATGAAGAGTCGGAACAAATTATTGCTGCTAACGTTAATCCCATTAGTGCTGCTGACAGCGATGGTGACAGCGGTTTTCTA
TTTTAACAGTGTAAAAAGCTTAGACGTTGAACTCAGCGAATATCGAAATGAGCTGATTGAAACGCGCAAAAGCGAGTTAA
AAGCCTATTTGATGATGGGCGTCACCGCCATTAAACCGCTGTATGACGCGGATGTGAATGGCAACAATCAACAACAAGCC
AAACAGATTTTGAAAGCAATGCGCTTTGAAAGTGATGGTTACTTTTTTGCTTATGATTCCAAAGGCGTCAACACGCTGCA
CGCGATCAAGCCGGAGTTGGAAGGTAAAAACCTTTACGGCATGAAAGATGACAATGGTGTCGCGGTGATAGCGGGGTTGA
TTGACGCTTCACAAAAAGGCGATGGCTTTCTTTATTTCTCTTGGCACAAGCCGACCATCAATGCGCAAGCGCCTAAATTG
GGTTATGCGGAATATCTACCAAAATGGGATTGGGTACTCGGCACAGGGATCTACATTGACGATATCGACACGCAAGTGGC
AGAGCATCGTGTACAAAGTATTGCCAGTTTGAATGAGCATACCTTATCGGCGATTGGATTCACGTTGGTGGGGTTATTGA
TTGCGTGTGGTGTGATCAGCGTGATTGTTTCTCGGGCGATTTTGCCGCTGCAACATATCGCGGCCTCATTGCAAGATGTA
GCGGCAGGCGGTGGCGATTTAACCGCTCGTTTGAGTGTCGAAAGCCAAGATGAAGTGGGGGAAGTGGCCAAAGCCTTCAA
CCAGTTTATGGACAAATTGCATCCTTTGATGGTCGATATTCGCAGCTCGGCGCAAACAGTGCAAAGCGCTGCCTCTGGGC
TGGATCAACAAACCTCGTTAGCCAGTAACCAAATGCAAACGCACTGTTTGGAGACGGATAAAGTAGTCACCGCCGTGACG
GAAATGAGCGCCACGGCGAGAGAAGTCGCCAACAATACCCATGCCACGGCGCAGGCCATTGATTCTGCCAATGCGCAGAT
CTCAGAAGCGCAAGTCGAAGTGAATCACGCGATAGAAGGGATTGGTAAATTGGTCGACGAAGTGAACATCACCTCAGACG
CCATTTCTCAGCTTAGCCAACAGACCGATCAAATCACCAAAGTGTTGCAAGTGATAGGCGAAATTGCCGAGCAAACGAAC
TTACTGGCATTGAATGCCGCCATTGAAGCGGCGCGTGCGGGAGAGCAAGGCCGCGGATTTGCCGTGGTTGCCGATGAAGT
TCGTTCATTAGCGAGTCGCACACAAAACAGCACGCTGGAAATTGGCGATATGCTTAAGCAGTTGCAAAATGGTGTGGCCA
GAGCGGTCACCACTATGTCTGCCAGCCAAGAGCGTGGCGAACAAACGGCGCTTGAGTCAGTGCAAATCAAAGAATCACTT
GCTGGTATCCAGTCGGCGGTGGAAATGATCCGTGATATGGGCATTCAAACGGCATCCGCCGCTGAACAACAGAGCGCGGT
CGCTGAGGACATCAATCAAAACCTGGTCACCATTCAGCAAATCGTTAATGAGATTAATCACAACTTACAAGAGTCGGAAA
CCATTAGCACACGCTTGAGTGTATCTGGCCAAGAAATGCATGATTTGGTCGGTCACTTTAAGCTCTGA

Upstream 100 bases:

>100_bases
CAGCACGTTGCTCACAGACATTGACTAAATAGACACCAGATAATGTTTGCGATACCTCTTAAAAATTAAAACAATCATAT
GGATAGCGACGGAACTTGTT

Downstream 100 bases:

>100_bases
TAAAATGCTCAGTTACATTATTGTCTTCTATTAATAACGAACCAGCATCGTCATACTAGACTTTGCTGGTTTTCTCGTTG
CAATAGGCGCATCTAAGATG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKSRNKLLLLTLIPLVLLTAMVTAVFYFNSVKSLDVELSEYRNELIETRKSELKAYLMMGVTAIKPLYDADVNGNNQQQA
KQILKAMRFESDGYFFAYDSKGVNTLHAIKPELEGKNLYGMKDDNGVAVIAGLIDASQKGDGFLYFSWHKPTINAQAPKL
GYAEYLPKWDWVLGTGIYIDDIDTQVAEHRVQSIASLNEHTLSAIGFTLVGLLIACGVISVIVSRAILPLQHIAASLQDV
AAGGGDLTARLSVESQDEVGEVAKAFNQFMDKLHPLMVDIRSSAQTVQSAASGLDQQTSLASNQMQTHCLETDKVVTAVT
EMSATAREVANNTHATAQAIDSANAQISEAQVEVNHAIEGIGKLVDEVNITSDAISQLSQQTDQITKVLQVIGEIAEQTN
LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTLEIGDMLKQLQNGVARAVTTMSASQERGEQTALESVQIKESL
AGIQSAVEMIRDMGIQTASAAEQQSAVAEDINQNLVTIQQIVNEINHNLQESETISTRLSVSGQEMHDLVGHFKL

Sequences:

>Translated_555_residues
MKSRNKLLLLTLIPLVLLTAMVTAVFYFNSVKSLDVELSEYRNELIETRKSELKAYLMMGVTAIKPLYDADVNGNNQQQA
KQILKAMRFESDGYFFAYDSKGVNTLHAIKPELEGKNLYGMKDDNGVAVIAGLIDASQKGDGFLYFSWHKPTINAQAPKL
GYAEYLPKWDWVLGTGIYIDDIDTQVAEHRVQSIASLNEHTLSAIGFTLVGLLIACGVISVIVSRAILPLQHIAASLQDV
AAGGGDLTARLSVESQDEVGEVAKAFNQFMDKLHPLMVDIRSSAQTVQSAASGLDQQTSLASNQMQTHCLETDKVVTAVT
EMSATAREVANNTHATAQAIDSANAQISEAQVEVNHAIEGIGKLVDEVNITSDAISQLSQQTDQITKVLQVIGEIAEQTN
LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTLEIGDMLKQLQNGVARAVTTMSASQERGEQTALESVQIKESL
AGIQSAVEMIRDMGIQTASAAEQQSAVAEDINQNLVTIQQIVNEINHNLQESETISTRLSVSGQEMHDLVGHFKL
>Mature_555_residues
MKSRNKLLLLTLIPLVLLTAMVTAVFYFNSVKSLDVELSEYRNELIETRKSELKAYLMMGVTAIKPLYDADVNGNNQQQA
KQILKAMRFESDGYFFAYDSKGVNTLHAIKPELEGKNLYGMKDDNGVAVIAGLIDASQKGDGFLYFSWHKPTINAQAPKL
GYAEYLPKWDWVLGTGIYIDDIDTQVAEHRVQSIASLNEHTLSAIGFTLVGLLIACGVISVIVSRAILPLQHIAASLQDV
AAGGGDLTARLSVESQDEVGEVAKAFNQFMDKLHPLMVDIRSSAQTVQSAASGLDQQTSLASNQMQTHCLETDKVVTAVT
EMSATAREVANNTHATAQAIDSANAQISEAQVEVNHAIEGIGKLVDEVNITSDAISQLSQQTDQITKVLQVIGEIAEQTN
LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTLEIGDMLKQLQNGVARAVTTMSASQERGEQTALESVQIKESL
AGIQSAVEMIRDMGIQTASAAEQQSAVAEDINQNLVTIQQIVNEINHNLQESETISTRLSVSGQEMHDLVGHFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=324, Percent_Identity=30.8641975308642, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787690, Length=246, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1788195, Length=518, Percent_Identity=25.6756756756757, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1789453, Length=241, Percent_Identity=33.6099585062241, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=338, Percent_Identity=25.7396449704142, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 60070; Mature: 60070

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRNKLLLLTLIPLVLLTAMVTAVFYFNSVKSLDVELSEYRNELIETRKSELKAYLMMG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAIKPLYDADVNGNNQQQAKQILKAMRFESDGYFFAYDSKGVNTLHAIKPELEGKNLYG
HHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC
MKDDNGVAVIAGLIDASQKGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYID
CCCCCCEEEEEEHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHEECCEEEE
DIDTQVAEHRVQSIASLNEHTLSAIGFTLVGLLIACGVISVIVSRAILPLQHIAASLQDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGGGDLTARLSVESQDEVGEVAKAFNQFMDKLHPLMVDIRSSAQTVQSAASGLDQQTSL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ASNQMQTHCLETDKVVTAVTEMSATAREVANNTHATAQAIDSANAQISEAQVEVNHAIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGKLVDEVNITSDAISQLSQQTDQITKVLQVIGEIAEQTNLLALNAAIEAARAGEQGRGF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCE
AVVADEVRSLASRTQNSTLEIGDMLKQLQNGVARAVTTMSASQERGEQTALESVQIKESL
EEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIQSAVEMIRDMGIQTASAAEQQSAVAEDINQNLVTIQQIVNEINHNLQESETISTRLS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
VSGQEMHDLVGHFKL
CCHHHHHHHHHHCCC
>Mature Secondary Structure
MKSRNKLLLLTLIPLVLLTAMVTAVFYFNSVKSLDVELSEYRNELIETRKSELKAYLMMG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAIKPLYDADVNGNNQQQAKQILKAMRFESDGYFFAYDSKGVNTLHAIKPELEGKNLYG
HHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC
MKDDNGVAVIAGLIDASQKGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYID
CCCCCCEEEEEEHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHEECCEEEE
DIDTQVAEHRVQSIASLNEHTLSAIGFTLVGLLIACGVISVIVSRAILPLQHIAASLQDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGGGDLTARLSVESQDEVGEVAKAFNQFMDKLHPLMVDIRSSAQTVQSAASGLDQQTSL
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ASNQMQTHCLETDKVVTAVTEMSATAREVANNTHATAQAIDSANAQISEAQVEVNHAIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGKLVDEVNITSDAISQLSQQTDQITKVLQVIGEIAEQTNLLALNAAIEAARAGEQGRGF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCE
AVVADEVRSLASRTQNSTLEIGDMLKQLQNGVARAVTTMSASQERGEQTALESVQIKESL
EEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIQSAVEMIRDMGIQTASAAEQQSAVAEDINQNLVTIQQIVNEINHNLQESETISTRLS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
VSGQEMHDLVGHFKL
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]