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The map label for this gene is gfcE [H]

Identifier: 27364235

GI number: 27364235

Start: 795671

End: 796807

Strand: Reverse

Name: gfcE [H]

Synonym: VV1_0786

Alternate gene names: 27364235

Gene position: 796807-795671 (Counterclockwise)

Preceding gene: 27364250

Following gene: 27364234

Centisome position: 24.28

GC content: 48.11

Gene sequence:

>1137_bases
ATGGAACTAAAAACAAAACTTCTGCTAGCGATGCTAGCGCCTGCCTTGCTTGCCGGTTGTACTGTACCCGGCTCACATCT
ATCCACCGATAATAAAAACCTTGTTGAAGTGAACGATAGCAGCCAAGAAAGTAACCTTTCTGAGGTGGTTAATCTGTATC
CGCTAAACGCTCAATCGGTCACGGAATACGCCAAAGCGCAGCATTTTGCTTCTCGCGCAAACCCAGAACTTGATGTGCAG
ATCGCACGCTATGAATACAAAGTGGGCCCTGGCGACATTCTTAACGTTACCATTTGGGATCACCCTGAACTGACGATTCC
CGCAGGCTCTTACCGTAGTGCATCTGAAGCAGGTAACTGGGTGCATGCAGATGGCACCATTTTCTATCCTTACATTGGCA
CTGTAGAAGTGGCAGATAAAACCGTGCGTGAGATCCGCGCCGATATCGCTAAACGTCTTGCGAAATTTATTGAAAGCCCA
CAGGTCGATGTCAACGTTGCCGCGTTCCGCTCTAAAAAAGCTTACATTACTGGTGAAGTTGAAAATCCAGGCCAACAAGC
CATCACCAATATCCCTTTAACCATTCTTGATGCGGTTAACCGTGCTGGTGGTCTAGCGGAAGATGCCGATTGGCGCAACG
TGACGCTTACTCGCAACGGTGAAGAGCAAGCTATTTCTCTTTACGCGCTTATGCAGCGCGGTGATTTAACGCAAAACCGT
TTATTAGAGCCGGGCGATATCATCCACGTGCCACGCAACGACAGCCAAAAAGTGTTTGTAATGGGAGAAGTGAAAGATCC
CAAACTGCTTAAAATGGATCGTTCAGGCATGAGCCTGACGGAAGCACTCAGCAGTGTCGGCGGCATCAACGAGCTCTCAG
CAGATGCAACTGGTGTGTTCGTTATCCGTACGTCAGACAACAAATCTGAACGCATGGCGGACATCTATCAGCTCAATATT
AAAGATGCCTCTGCACTAGTGATTGGCACAGAATTCGATCTAAAACCATACGATATCGTTTATGTGACCGCCGCACCGAT
CTCTCGCTGGAACCGTGTAATTGGTCAGTTATTACCAACGATCAACGGCTTCAACAACCTAACTGAAGGTGCTCTACGCG
TTAAAACGTGGCCGTAA

Upstream 100 bases:

>100_bases
ACCTATGCTTTCAAAAGCGTTAGAAAGAAATGGTGTTCAATCGAACCTTTGCTCATTCAAGAGTGCTGTAAACACTCTTA
ATTTAGACGATTTGGCTTAC

Downstream 100 bases:

>100_bases
GATAATTTAAAAGCGGTCCTATGGCCCTTGGGTCCTAGGGGCTAATGGATTGGATAAGTCTCGTGTAAGCAAGGATGGTT
GATGAGGGTTTTGGGATTTG

Product: polysaccharide export protein Wza

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSEVVNLYPLNAQSVTEYAKAQHFASRANPELDVQ
IARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGNWVHADGTIFYPYIGTVEVADKTVREIRADIAKRLAKFIESP
QVDVNVAAFRSKKAYITGEVENPGQQAITNIPLTILDAVNRAGGLAEDADWRNVTLTRNGEEQAISLYALMQRGDLTQNR
LLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVFVIRTSDNKSERMADIYQLNI
KDASALVIGTEFDLKPYDIVYVTAAPISRWNRVIGQLLPTINGFNNLTEGALRVKTWP

Sequences:

>Translated_378_residues
MELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSEVVNLYPLNAQSVTEYAKAQHFASRANPELDVQ
IARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGNWVHADGTIFYPYIGTVEVADKTVREIRADIAKRLAKFIESP
QVDVNVAAFRSKKAYITGEVENPGQQAITNIPLTILDAVNRAGGLAEDADWRNVTLTRNGEEQAISLYALMQRGDLTQNR
LLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVFVIRTSDNKSERMADIYQLNI
KDASALVIGTEFDLKPYDIVYVTAAPISRWNRVIGQLLPTINGFNNLTEGALRVKTWP
>Mature_378_residues
MELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSEVVNLYPLNAQSVTEYAKAQHFASRANPELDVQ
IARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGNWVHADGTIFYPYIGTVEVADKTVREIRADIAKRLAKFIESP
QVDVNVAAFRSKKAYITGEVENPGQQAITNIPLTILDAVNRAGGLAEDADWRNVTLTRNGEEQAISLYALMQRGDLTQNR
LLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVFVIRTSDNKSERMADIYQLNI
KDASALVIGTEFDLKPYDIVYVTAAPISRWNRVIGQLLPTINGFNNLTEGALRVKTWP

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=374, Percent_Identity=60.427807486631, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI1788376, Length=381, Percent_Identity=56.9553805774278, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 41468; Mature: 41468

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSEVVNLYPLNAQSV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHEEECCCHHHH
TEYAKAQHFASRANPELDVQIARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGNW
HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCHHHCCCE
VHADGTIFYPYIGTVEVADKTVREIRADIAKRLAKFIESPQVDVNVAAFRSKKAYITGEV
EEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECC
ENPGQQAITNIPLTILDAVNRAGGLAEDADWRNVTLTRNGEEQAISLYALMQRGDLTQNR
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHH
LLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVF
CCCCCCEEECCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEE
VIRTSDNKSERMADIYQLNIKDASALVIGTEFDLKPYDIVYVTAAPISRWNRVIGQLLPT
EEEECCCCHHHHEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHH
INGFNNLTEGALRVKTWP
CCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSEVVNLYPLNAQSV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHEEECCCHHHH
TEYAKAQHFASRANPELDVQIARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGNW
HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCHHHCCCE
VHADGTIFYPYIGTVEVADKTVREIRADIAKRLAKFIESPQVDVNVAAFRSKKAYITGEV
EEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECC
ENPGQQAITNIPLTILDAVNRAGGLAEDADWRNVTLTRNGEEQAISLYALMQRGDLTQNR
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHH
LLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVF
CCCCCCEEECCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEE
VIRTSDNKSERMADIYQLNIKDASALVIGTEFDLKPYDIVYVTAAPISRWNRVIGQLLPT
EEEECCCCHHHHEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHH
INGFNNLTEGALRVKTWP
CCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]