Click here to switch to the map view.

The map label for this gene is yfcA [H]

Identifier: 27364025

GI number: 27364025

Start: 574358

End: 575146

Strand: Reverse

Name: yfcA [H]

Synonym: VV1_0563

Alternate gene names: 27364025

Gene position: 575146-574358 (Counterclockwise)

Preceding gene: 27364027

Following gene: 27364014

Centisome position: 17.52

GC content: 49.81

Gene sequence:

>789_bases
ATGCTTGAATTGGACATAACGATTGAGATGTTGGCAGCACTGTTCTTTGTTGCTTCTGTGGCTGGTTTTATTGATGCCAT
GGCGGGTGGTGGTGGACTGCTCACTCTTCCTGCGTTGTTGGCTTCAGGGTTGAGCCCAACACAAGCATTGGCGACCAATA
AGTTGCAAAGCTCATTCGGCAGTTTCTCAGCCAGCTTATATTTTGTCCGTAATGGCATCGTTAGTTTAAAAGAGATGAAA
GTCGCCATCGCATGCACCTTTATAGGGGCGGCCATCGGGGCAGAGCTTGTTCAAGTGATTGATGCCAGCGTGCTAACCAG
CTTGATTCCCGTGCTGCTAATCGCGATTTCGCTCTATTTTTTACTCGCGCCGCCCACCCGCAATACAGGGGGACAGCCAA
AGTTATCCGAGGCGATGTTTGCACTGTCGGTCGGTGGTGGTGTTGGTTTCTATGATGGTTTTTTTGGCCCGGGAACGGGA
TCGATCTTTACCGTTTGTTTTGTTGTGCTTGGGCAGTTTTCCCTCGTTGAAGCCACTGCGCGAACCAAGGTGCTCAATTT
TACCTCTAACATCGCGGCATTGCTGTTTTTTGTGCTGGCGGGATTGCCAGTCTGGAAAGTGGGCTTAGTGATGGCAGTGG
GGGGCTTTATTGGTGCGCGCTTGGGGGCAAAAGTGGTGGTGACCAAAGGACACAAATGGATCCGTCCTCTGGTCATTGTG
ATGTCGATGGCAATGGCTTCTAAACTACTTTGGCAACAGCATCAGCAATGGTTGTTATCACTGTTTTAA

Upstream 100 bases:

>100_bases
ATTGATGAATTTTAGGAATGGATTGCTGTCTTGGGTTTCCTTTTTACCTCGCTAGTTTTGATGCTACCGTCTTGTTCTTT
ACTCTTCCTCTTTGAAAAGG

Downstream 100 bases:

>100_bases
CTCGGCTGTTTTGATGACTTTTGGCGCGGCAACATATCGTCACCGGACGAGTGAGATGGCTAAGCTCGTCAAAGTGATAG
CAATACTGTGGCTCTATTCG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLELDITIEMLAALFFVASVAGFIDAMAGGGGLLTLPALLASGLSPTQALATNKLQSSFGSFSASLYFVRNGIVSLKEMK
VAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISLYFLLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTG
SIFTVCFVVLGQFSLVEATARTKVLNFTSNIAALLFFVLAGLPVWKVGLVMAVGGFIGARLGAKVVVTKGHKWIRPLVIV
MSMAMASKLLWQQHQQWLLSLF

Sequences:

>Translated_262_residues
MLELDITIEMLAALFFVASVAGFIDAMAGGGGLLTLPALLASGLSPTQALATNKLQSSFGSFSASLYFVRNGIVSLKEMK
VAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISLYFLLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTG
SIFTVCFVVLGQFSLVEATARTKVLNFTSNIAALLFFVLAGLPVWKVGLVMAVGGFIGARLGAKVVVTKGHKWIRPLVIV
MSMAMASKLLWQQHQQWLLSLF
>Mature_262_residues
MLELDITIEMLAALFFVASVAGFIDAMAGGGGLLTLPALLASGLSPTQALATNKLQSSFGSFSASLYFVRNGIVSLKEMK
VAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISLYFLLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTG
SIFTVCFVVLGQFSLVEATARTKVLNFTSNIAALLFFVLAGLPVWKVGLVMAVGGFIGARLGAKVVVTKGHKWIRPLVIV
MSMAMASKLLWQQHQQWLLSLF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=251, Percent_Identity=52.5896414342629, Blast_Score=248, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27512; Mature: 27512

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDITIEMLAALFFVASVAGFIDAMAGGGGLLTLPALLASGLSPTQALATNKLQSSFG
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SFSASLYFVRNGIVSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISLYF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFVVLGQFSLVEATA
HHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
RTKVLNFTSNIAALLFFVLAGLPVWKVGLVMAVGGFIGARLGAKVVVTKGHKWIRPLVIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
MSMAMASKLLWQQHQQWLLSLF
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLELDITIEMLAALFFVASVAGFIDAMAGGGGLLTLPALLASGLSPTQALATNKLQSSFG
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SFSASLYFVRNGIVSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISLYF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFVVLGQFSLVEATA
HHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
RTKVLNFTSNIAALLFFVLAGLPVWKVGLVMAVGGFIGARLGAKVVVTKGHKWIRPLVIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
MSMAMASKLLWQQHQQWLLSLF
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]