Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 27363998

GI number: 27363998

Start: 536578

End: 537354

Strand: Reverse

Name: yaaA [C]

Synonym: VV1_0535

Alternate gene names: 27363998

Gene position: 537354-536578 (Counterclockwise)

Preceding gene: 27363999

Following gene: 27363995

Centisome position: 16.37

GC content: 46.72

Gene sequence:

>777_bases
ATGCTTATCGTTGTTTCACCAGCTAAAACGCTGGACTACGAATCACCACTCGTGACCCACAAGTTCACTCAGCCAGAGCT
CGTGGATTACTCAAAACAGTTGATTGAAGTTTGCCGCCAGTTGACGCCTGCGGATGTGGCTTCGTTGATGAAAGTGAGTG
ATAAAATCGCCGATCTCAATGTGGGTCGCTTCCAAGAGTGGAGCGAAGAATTCACTCCAGATAACGCGCGCCAAGCGATT
CTGGCTTTTAAAGGTGATGTGTACACAGGGCTTGAAGCGGAAACGCTCAACGATGACGATTTTGATTACGCGCAAAAACA
TTTGCGTATGCTATCTGGGCTGTATGGGCTATTAAAGCCACTGGATCTGATGCAACCCTATCGCTTGGAGATGGGCACAA
AATTGGCCAACCCCAAAGGCAGTAATCTTTATCAGTTTTGGGGCAATGTGATCACTGAGAAACTTAATGAGGCGATTGTG
GCTCAAGGTGATAACGTGTTGATCAATCTGGCGTCCAATGAGTATTTTAAAGCGGTGAAACCGAAAGCCTTGGACGCGCA
AGTGATCACGCCGATTTTTAAAGATGCGAAGAACGGTCAATACAAGGTCATTAGCTTTTTTGCTAAAAAGGCGCGAGGCA
TGATGGCGCGCTACATCATTGAAAATCGTATTTCGAGTGTGGCGGATTTAACTCAATTTGACAGTGCGGGTTACTACTTC
GTCGAAGAAGAGTCGACCCCGACAGAATTGGTGTTTAAGCGCGAAGAGCAACACTGA

Upstream 100 bases:

>100_bases
GAAATCGAGATTTTCTATCACTGTGATTCGAAAAGCCGTGCAGACAATGCACGGCTTTTTTTGTACCCTAGACAAAAAGA
AAATAAGGGAAAGAATCGTC

Downstream 100 bases:

>100_bases
GATTTGGTTTTAGTTAAGGTCTGAAAACAGAAAGGGTTGGCACAGTGCCAACCCTTTTACGTTATCGAACCATTACTTTT
TCTTTTTGGTGCTTTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLIVVSPAKTLDYESPLVTHKFTQPELVDYSKQLIEVCRQLTPADVASLMKVSDKIADLNVGRFQEWSEEFTPDNARQAI
LAFKGDVYTGLEAETLNDDDFDYAQKHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGSNLYQFWGNVITEKLNEAIV
AQGDNVLINLASNEYFKAVKPKALDAQVITPIFKDAKNGQYKVISFFAKKARGMMARYIIENRISSVADLTQFDSAGYYF
VEEESTPTELVFKREEQH

Sequences:

>Translated_258_residues
MLIVVSPAKTLDYESPLVTHKFTQPELVDYSKQLIEVCRQLTPADVASLMKVSDKIADLNVGRFQEWSEEFTPDNARQAI
LAFKGDVYTGLEAETLNDDDFDYAQKHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGSNLYQFWGNVITEKLNEAIV
AQGDNVLINLASNEYFKAVKPKALDAQVITPIFKDAKNGQYKVISFFAKKARGMMARYIIENRISSVADLTQFDSAGYYF
VEEESTPTELVFKREEQH
>Mature_258_residues
MLIVVSPAKTLDYESPLVTHKFTQPELVDYSKQLIEVCRQLTPADVASLMKVSDKIADLNVGRFQEWSEEFTPDNARQAI
LAFKGDVYTGLEAETLNDDDFDYAQKHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGSNLYQFWGNVITEKLNEAIV
AQGDNVLINLASNEYFKAVKPKALDAQVITPIFKDAKNGQYKVISFFAKKARGMMARYIIENRISSVADLTQFDSAGYYF
VEEESTPTELVFKREEQH

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=258, Percent_Identity=65.5038759689922, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y535_VIBVU (Q8DEQ1)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_759526.1
- GeneID:   1177488
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_0535
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- BioCyc:   VVUL216895:VV1_0535-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29270; Mature: 29270

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVVSPAKTLDYESPLVTHKFTQPELVDYSKQLIEVCRQLTPADVASLMKVSDKIADLN
CEEEECCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
VGRFQEWSEEFTPDNARQAILAFKGDVYTGLEAETLNDDDFDYAQKHLRMLSGLYGLLKP
CCHHHHHHHHCCCCHHHHHHHEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPKGSNLYQFWGNVITEKLNEAIVAQGDNVLINLASNEYFKAVK
HHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCC
PKALDAQVITPIFKDAKNGQYKVISFFAKKARGMMARYIIENRISSVADLTQFDSAGYYF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VEEESTPTELVFKREEQH
EECCCCCHHHHHCCCCCC
>Mature Secondary Structure
MLIVVSPAKTLDYESPLVTHKFTQPELVDYSKQLIEVCRQLTPADVASLMKVSDKIADLN
CEEEECCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
VGRFQEWSEEFTPDNARQAILAFKGDVYTGLEAETLNDDDFDYAQKHLRMLSGLYGLLKP
CCHHHHHHHHCCCCHHHHHHHEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPKGSNLYQFWGNVITEKLNEAIVAQGDNVLINLASNEYFKAVK
HHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCC
PKALDAQVITPIFKDAKNGQYKVISFFAKKARGMMARYIIENRISSVADLTQFDSAGYYF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VEEESTPTELVFKREEQH
EECCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA