| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363981
Identifier: 27363981
GI number: 27363981
Start: 516968
End: 517759
Strand: Reverse
Name: 27363981
Synonym: VV1_0518
Alternate gene names: NA
Gene position: 517759-516968 (Counterclockwise)
Preceding gene: 326423726
Following gene: 161501844
Centisome position: 15.78
GC content: 49.37
Gene sequence:
>792_bases GTGACGTTTGAATTATTAAGTGTGTTGTTGGTGCTGGGTGCGTTTGTTGGCGTGATGGCAGGGTTATTAGGCATCGGTGG TGGTTTGATTGTGGTGCCTGCGTTGCTTTACTTATTGCCGTGGGCTGGAATTCCCACAGAATTGAGCATGCACATGGCAT TAGCAACGTCTTTAGCCAGTATTATTGTTACCTCGGGCTCTTCAGCGTTAAATCATCTCAAATTGGGCAACGTGGATATC TTTGTCGTGAAGTGGCTGATGCCGGGAGTGGTGATTGGTGGATTTGTCGGGGCGAATATCGCCGAATGGATCCCAACCCA ATATTTGCCGAGAGTGTTTGGGGTTATCGTTTTATTCTTGGCACTGCAAATGTTCCGCTCGATTCGAGTGACGACAACCC GCGCAATGCCAAGCAGCCCAGTCACCATGCTGTATGGTACAGGTATCGGAGTGGTATCGAGTTTAGCAGGGATCGGTGGT GGTTCTTTATCGGTTCCGTTTCTTAACCGACACGGCGTTGAAATGCGCAAAGCTGTTGGATCCTCATCGGTATGCGGTTG TGTGATTGCGATAGCGGGGATGACGGGATTCATCCTGCATGGCTACAGCGTCGCTTCATTACCTGATTACAGTGTGGGCT ATGTTTATCTACCAGCCCTGCTGGCGATTGCAGGAACCTCAATGCTAACCACTCGAATTGGTGCTCGCTGGGCCACCACG CTTCCAACGGCAAAGCTGAAAAAAATCTTTGCGTTATTTTTAATGTTTGTCGCGCTCAGCATGTTAGTCTAG
Upstream 100 bases:
>100_bases GTCGCTTTCTTATGGCAAGGATATTCACCAGTTGATGCGGGATTATTTTATTAATCATGATTTTGCCGGTTTTATCCGTG CAGGTAAGAAGTAGGTTGCT
Downstream 100 bases:
>100_bases CCGCGTTATTTCAAAGTTGATGATTAAGAGTACTTCATTATGTCTCAGGGTTACCTGCCTTTTCCTAATATCGACCCCGT CTTTTTCTCGATAGGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTFELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGSSALNHLKLGNVDI FVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFLALQMFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGG GSLSVPFLNRHGVEMRKAVGSSSVCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATT LPTAKLKKIFALFLMFVALSMLV
Sequences:
>Translated_263_residues MTFELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGSSALNHLKLGNVDI FVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFLALQMFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGG GSLSVPFLNRHGVEMRKAVGSSSVCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATT LPTAKLKKIFALFLMFVALSMLV >Mature_262_residues TFELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGSSALNHLKLGNVDIF VVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFLALQMFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGG SLSVPFLNRHGVEMRKAVGSSSVCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTL PTAKLKKIFALFLMFVALSMLV
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27493; Mature: 27361
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLAS CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IIVTSGSSALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFL HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHH ALQMFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVG HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCC SSSVCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATT CCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC LPTAKLKKIFALFLMFVALSMLV CCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TFELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLAS CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IIVTSGSSALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFL HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHH ALQMFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVG HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCC SSSVCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATT CCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC LPTAKLKKIFALFLMFVALSMLV CCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]