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The map label for this gene is yfiH [H]

Identifier: 27363947

GI number: 27363947

Start: 480407

End: 481123

Strand: Reverse

Name: yfiH [H]

Synonym: VV1_0483

Alternate gene names: 27363947

Gene position: 481123-480407 (Counterclockwise)

Preceding gene: 27363948

Following gene: 27363946

Centisome position: 14.66

GC content: 48.26

Gene sequence:

>717_bases
ATGCTTATCCCCAACTGGCCTGCGCCTAAGAATGTCAAAGCATTATCGTCGACTCGCCAAGGTGGCTATTCGACGGGTGT
TTACACTGGTTTGAACTTAGGCACACATGTTGGGGATGATTTTTCAATAGTAATGAGAAATCGTCAATGGTTAGCCGAAC
AGGCTCAGATGCCGAGTGCACCGATTTGGCTCAATCAAACTCATTCTACGACGGTGATTGAAGCAACAGGACCAACCGAA
GTAATCCTTGATGCTGATGGGGTTTTTACTCATTCCTCTGATGTCGTTTGCAGTGCGATGACTGCCGATTGTTTACCCGT
TTTAATCACCAATACCTCAGGGACGCAAGTTGCCGCCGTGCATGCGGGTTGGCGTGGTTTGGCGGGCGGGATCGTTGAGG
AAGCACTTCGTCACTTTTCACAAGATGTGCTGATTTGGCTTGGCCCTGCGATCGGTCCTCAGGCTTTTGAAGTCGGAGAG
GATGTGGTGGAGGCTTTTTGCCAACAACACCCTCAAGCAGTGAATGCGTTTTCTACTCATATCACACCAAATAAGTGGTT
GGCTGATATGGATCAGCTGGCGCGTATTCGTCTCTCTTCAATAGGGGTTGAGGCGATTTACTCTTCTGAATTGTGTACCT
ATCAAGATTCACGCTTCTATTCTTACCGTCGCGAAGGTGTCACTGGACGTCAAGCGAGCTTTATCTGGTTTGAATAA

Upstream 100 bases:

>100_bases
GATGGAGTTCCATGCGCCGGTGCCAGACGATATGGTTGAGTTGACTGAAACTTTACGTCGTGATGCACAAGAGCATGGTT
TACCAGACGAGTACTGATTG

Downstream 100 bases:

>100_bases
CGTCAGTTTAATTTACCGAGCGTTAGTTTTTAATTCCCCCTTGAAAAACGATTTTTGCGTAGCCATCTTTCATACTGATT
AAAGAATTTACTTCAGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLIPNWPAPKNVKALSSTRQGGYSTGVYTGLNLGTHVGDDFSIVMRNRQWLAEQAQMPSAPIWLNQTHSTTVIEATGPTE
VILDADGVFTHSSDVVCSAMTADCLPVLITNTSGTQVAAVHAGWRGLAGGIVEEALRHFSQDVLIWLGPAIGPQAFEVGE
DVVEAFCQQHPQAVNAFSTHITPNKWLADMDQLARIRLSSIGVEAIYSSELCTYQDSRFYSYRREGVTGRQASFIWFE

Sequences:

>Translated_238_residues
MLIPNWPAPKNVKALSSTRQGGYSTGVYTGLNLGTHVGDDFSIVMRNRQWLAEQAQMPSAPIWLNQTHSTTVIEATGPTE
VILDADGVFTHSSDVVCSAMTADCLPVLITNTSGTQVAAVHAGWRGLAGGIVEEALRHFSQDVLIWLGPAIGPQAFEVGE
DVVEAFCQQHPQAVNAFSTHITPNKWLADMDQLARIRLSSIGVEAIYSSELCTYQDSRFYSYRREGVTGRQASFIWFE
>Mature_238_residues
MLIPNWPAPKNVKALSSTRQGGYSTGVYTGLNLGTHVGDDFSIVMRNRQWLAEQAQMPSAPIWLNQTHSTTVIEATGPTE
VILDADGVFTHSSDVVCSAMTADCLPVLITNTSGTQVAAVHAGWRGLAGGIVEEALRHFSQDVLIWLGPAIGPQAFEVGE
DVVEAFCQQHPQAVNAFSTHITPNKWLADMDQLARIRLSSIGVEAIYSSELCTYQDSRFYSYRREGVTGRQASFIWFE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=238, Percent_Identity=28.1512605042017, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI190194372, Length=238, Percent_Identity=28.1512605042017, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788945, Length=241, Percent_Identity=48.9626556016597, Blast_Score=236, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26031; Mature: 26031

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPNWPAPKNVKALSSTRQGGYSTGVYTGLNLGTHVGDDFSIVMRNRQWLAEQAQMPSA
CCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCC
PIWLNQTHSTTVIEATGPTEVILDADGVFTHSSDVVCSAMTADCLPVLITNTSGTQVAAV
CEEEECCCCEEEEEECCCCEEEEECCCCEECCCCCEEHHHHCCCEEEEEECCCCCEEEEE
HAGWRGLAGGIVEEALRHFSQDVLIWLGPAIGPQAFEVGEDVVEAFCQQHPQAVNAFSTH
ECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC
ITPNKWLADMDQLARIRLSSIGVEAIYSSELCTYQDSRFYSYRREGVTGRQASFIWFE
CCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure
MLIPNWPAPKNVKALSSTRQGGYSTGVYTGLNLGTHVGDDFSIVMRNRQWLAEQAQMPSA
CCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCC
PIWLNQTHSTTVIEATGPTEVILDADGVFTHSSDVVCSAMTADCLPVLITNTSGTQVAAV
CEEEECCCCEEEEEECCCCEEEEECCCCEECCCCCEEHHHHCCCEEEEEECCCCCEEEEE
HAGWRGLAGGIVEEALRHFSQDVLIWLGPAIGPQAFEVGEDVVEAFCQQHPQAVNAFSTH
ECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC
ITPNKWLADMDQLARIRLSSIGVEAIYSSELCTYQDSRFYSYRREGVTGRQASFIWFE
CCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]