| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363871
Identifier: 27363871
GI number: 27363871
Start: 394170
End: 395912
Strand: Reverse
Name: 27363871
Synonym: VV1_0403
Alternate gene names: NA
Gene position: 395912-394170 (Counterclockwise)
Preceding gene: 326423706
Following gene: 27363868
Centisome position: 12.06
GC content: 48.08
Gene sequence:
>1743_bases ATGTTAACCAGTCCATTTCGTTTACCCAGACATACGCCTTTTGGCTTGGGAGAATCACTGGTTGAGTGGATGACGGGTTT AGCAAAACTTGATGGCTTTTATCAAGCTCGTCCGAACACTCAAAGCAGTTTTGAATTTATGCGCTATACCCTCTCTGCGT TGAACATTGATTATCGTGTCGAACAGGGCTTAGTCACGCACATTCCTGAGCAAGGGCCGGTTGTGATCGTGGCCAATCAT CCGCTTGGGGCAATTGAAGGTGTGATCTTAGCTGACTTGGTCGGCGCAGTACGTTCAGATGTGAAGGTGCTGGCCAATCA ACTGCTCAAGCGCTTGCCTGAAATTGATGAGTTGTTTATTGGTATCGATGTTTTTGCAGGGCGCAGTGCAATGCGTACGA ATGCCAACGCAGTGCGAGAAGCTCATCGTCATTTGGCGCAAGGAGGCGTGTTGATAGTCTTTCCTGCCGGAGAAGTTTCC ACCTATCGAGAGGAGAGTGAAACCCTATCCGATATTGAATGGAGCCAATCGGTGGCGAAGTTTGTCACTCGTGCCAAAGC CACGACAATCCCCATTTATATTAATGGCCAAAATAGTGCGCTTTTTTACAAAGCCGGAAAAGTACACCCTCTGCTGCGCA CCGCTTTGCTTGGTCGAGAGTTGCTGAACAAGAGTACTTCTACGATTGCCATTTCGATCGGAAATCCCATTCCTTATTCC GAGGTGAAAGAGTTTGAACATGAGCGAGATATTGTCCATTACTTACGGCTCAATACGTATCTCATGGGCGCAGAGCGAGA ACCACCGTTTGCCTTTTGCTCACCAGTGTACACGCAACCGCTCATCCAACCGGTTGAGAAAGCTTTGTTGGAACGCGATC TGGCGGCTCTGCCTTCAAACGCGTTACTGCTAGAGCAAGGTGATTACGCCGTCTACTGTGTGGAATCGACAGCGATCCCT AATATGCTCAGGGAAATTGGCCGAGTTCGAGAAGAAAGTTTTCGTGAAGTGGGAGAGGGCAGTGGCTTGGCGTGCGATTT GGATCCCTTTGATGCCAGTTATCGACAATTGTTTGTTTGGAATCACAGTGAAGGCGAGTTGGTAGGGGCTTATCGATTAG GGCTGGTGGATGAACTTACCGTAGAGAAAGGCCTTGATGGGCTCTATTCGCGAAGCTTGTTTCAATACGACGAAGCCTTT CTCAATACGCTGGATAAAAGTATTGAATTGGGGCGCTCAGTGGTTGCCATCAAATACCAGCGCAGTTTGAATGCTTTGCT GCTTTTGTGGAAAGGCATCGCTGCGTTTGTGTCGCAACATCCTCAATACACTCATTTGTTTGGCCCTGTTAGCATCAGTA ATGACTACAGTTCAGTGGCTAGACAACTGATGGCGGCCACGCTTTCGATTCATCATTACGATCAAGAAAAAGCGCGATTA GTGACTCCCACCACACCATTAAAAACAAGCACATCACCTTTTTGGCACAAGAATCTGCTCTCGGCATTGGCCAGTGTTTC AGCGTTATCTAAAGTGATTTCGCGTTTGGAAAAAGGCCCTGGCCTACCAGTATTGCTACGCCAATATTTAGGCATGAAGG GGAAACTGGTGTGTTTTAACGTGGACCCTGCCTTTAACCACGCGCTGGATGGTTTGATCGTGGTGAACTTGAAACAAGTC CCGCTGAAAACGTTAGCCAAATATATGGGCAAGGAAGCCGCCCAGCGCTACCTTGAGCAATAA
Upstream 100 bases:
>100_bases AGCGCCGCAGCGACACATCACACAAGCCGATGCGAATTGGCCAGCGATGCTGAAGTGATAGCTGTTTGATGTTGGTTTTA ACTCGCGTGGAGAGAGAAGT
Downstream 100 bases:
>100_bases GGTTTACAAAAATAGAAGAGACTTAATAAAGGCTAACTCTTTGAGTTAGCCTTTATATTGCTGAACTACTCTCAAATAAA TAGCGTTGTTCGCAAGGACG
Product: putative hemolysin
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Hemolysin A; Acyltransferase; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; Phospholipid/Glycerol Acyltransferase Hemolysin; DNA Polymerase III Subunit Alpha; Sulfolipid Biosynthesis Protein SqdA; Acetyltransferase
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MLTSPFRLPRHTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRTNANAVREAHRHLAQGGVLIVFPAGEVS TYREESETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSTSTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGAEREPPFAFCSPVYTQPLIQPVEKALLERDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDPFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPTTPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ
Sequences:
>Translated_580_residues MLTSPFRLPRHTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRTNANAVREAHRHLAQGGVLIVFPAGEVS TYREESETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSTSTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGAEREPPFAFCSPVYTQPLIQPVEKALLERDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDPFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPTTPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ >Mature_580_residues MLTSPFRLPRHTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRTNANAVREAHRHLAQGGVLIVFPAGEVS TYREESETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSTSTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGAEREPPFAFCSPVYTQPLIQPVEKALLERDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDPFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPTTPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64473; Mature: 64473
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSPFRLPRHTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHH EQGLVTHIPEQGPVVIVANHPLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFI HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE GIDVFAGRSAMRTNANAVREAHRHLAQGGVLIVFPAGEVSTYREESETLSDIEWSQSVAK EHHHHCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH FVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSTSTIAISIGNPIPYS HHHHHCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVKEFEHERDIVHYLRLNTYLMGAEREPPFAFCSPVYTQPLIQPVEKALLERDLAALPSN HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ALLLEQGDYAVYCVESTAIPNMLREIGRVREESFREVGEGSGLACDLDPFDASYRQLFVW CEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE NHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAFLNTLDKSIELGRSVVAIKYQ ECCCCCEEEHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH RSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEE VTPTTPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFN ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDPAFNHALDGLIVVNLKQVPLKTLAKYMGKEAAQRYLEQ CCHHHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure MLTSPFRLPRHTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHH EQGLVTHIPEQGPVVIVANHPLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFI HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE GIDVFAGRSAMRTNANAVREAHRHLAQGGVLIVFPAGEVSTYREESETLSDIEWSQSVAK EHHHHCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH FVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSTSTIAISIGNPIPYS HHHHHCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVKEFEHERDIVHYLRLNTYLMGAEREPPFAFCSPVYTQPLIQPVEKALLERDLAALPSN HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ALLLEQGDYAVYCVESTAIPNMLREIGRVREESFREVGEGSGLACDLDPFDASYRQLFVW CEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE NHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAFLNTLDKSIELGRSVVAIKYQ ECCCCCEEEHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH RSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEE VTPTTPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFN ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDPAFNHALDGLIVVNLKQVPLKTLAKYMGKEAAQRYLEQ CCHHHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA