Click here to switch to the map view.

The map label for this gene is insN [H]

Identifier: 27363854

GI number: 27363854

Start: 367972

End: 368268

Strand: Reverse

Name: insN [H]

Synonym: VV1_0386

Alternate gene names: 27363854

Gene position: 368268-367972 (Counterclockwise)

Preceding gene: 27363857

Following gene: 326423699

Centisome position: 11.22

GC content: 46.13

Gene sequence:

>297_bases
ATGACAGGTGAAGCTATGACCAAGCGTACCAGACGCACTTTCAGTGCAGAATTTAAACTCGAAGCAGCACAGCTTGTGCT
CGACCAAAACTACACCGTTGTTGAAGCTGCAAAAGCCATGGGTGTCGGTAAATCGACAATGGACAAGTGGGTAAGGCAGC
TTAAGCAAGAAAGAAAGGGAGTCACTCCCCAAGCCGCACCTATGACACCAGAGCAAATTGAGATACGTGAGCTGAAGAAG
AAACTTGCACGCCTTGAAGAGCACAATGAAATATTAAAAAAGCTACAGCTCTCTTGA

Upstream 100 bases:

>100_bases
TTACAATAACTATACTGTTGCAATGGTTTTTTTACTGTATTTTGTAGTGACATAGTGAATTTGGCCACCTGATTAGAGGT
GTTAAGATGCACCTCATAGC

Downstream 100 bases:

>100_bases
TGTCGGACTCGCTGAACAGCTCTCGATAATCGAGAAACTCAGGCAGAGCTTTAGTGTAACCACCTTGTGTCATGTGTTCA
GTGTCCAGCGTAGCAGCTAC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTGEAMTKRTRRTFSAEFKLEAAQLVLDQNYTVVEAAKAMGVGKSTMDKWVRQLKQERKGVTPQAAPMTPEQIEIRELKK
KLARLEEHNEILKKLQLS

Sequences:

>Translated_98_residues
MTGEAMTKRTRRTFSAEFKLEAAQLVLDQNYTVVEAAKAMGVGKSTMDKWVRQLKQERKGVTPQAAPMTPEQIEIRELKK
KLARLEEHNEILKKLQLS
>Mature_97_residues
TGEAMTKRTRRTFSAEFKLEAAQLVLDQNYTVVEAAKAMGVGKSTMDKWVRQLKQERKGVTPQAAPMTPEQIEIRELKKK
LARLEEHNEILKKLQLS

Specific function: Involved in the transposition of the insertion sequence IS911 [H]

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 11228; Mature: 11097

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEAMTKRTRRTFSAEFKLEAAQLVLDQNYTVVEAAKAMGVGKSTMDKWVRQLKQERKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
VTPQAAPMTPEQIEIRELKKKLARLEEHNEILKKLQLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGEAMTKRTRRTFSAEFKLEAAQLVLDQNYTVVEAAKAMGVGKSTMDKWVRQLKQERKG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
VTPQAAPMTPEQIEIRELKKKLARLEEHNEILKKLQLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163395 [H]