| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363852
Identifier: 27363852
GI number: 27363852
Start: 366773
End: 367117
Strand: Reverse
Name: 27363852
Synonym: VV1_0383
Alternate gene names: NA
Gene position: 367117-366773 (Counterclockwise)
Preceding gene: 326423699
Following gene: 326423698
Centisome position: 11.19
GC content: 40.29
Gene sequence:
>345_bases ATGGGCAAAGCAAAATCAGTCACAATTGCAGGGAAGCTATTTAAGAAACAAGGCGACGCTATTAGCTATTTCACCGAGCA GAAGGAAGAACAGCTATCAAGCGGATTAATTCAGGCAGGTGAGCTATATGAAGCACTCAAAGATGTATACGTAAGATACT GTGATAACTCACCTGGTTATGAGCTAAATGGTCGATTGATTACAGCTTTCAGTGTTGCCTACGAGAAACGTCAAAATAAT GGTGTATGGGCATCACATCCTTGTTATAAGGTTCATTTCTCCAATGACGAGATAAGACCATTTTCAATCGTTAAAGCAGT TAGATCAGCCGCTGAAAGTGTCTAA
Upstream 100 bases:
>100_bases TTTAGTTGAATATTAAGCTAACTTATAAGCGGACAAAAAGAGTTGGGTTCAAGTCAGGGGCGTAAGATAAGTCAACAACT AGATCTAAAGGATAATATTA
Downstream 100 bases:
>100_bases CGTGGCGATAATTTATTATTTGATACCTGAAGTCGGCTTACTGAATAGATACCCCAGAATTGGTTTAGAGTGCGGCATTT GGAAATTTTTATAGAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGKAKSVTIAGKLFKKQGDAISYFTEQKEEQLSSGLIQAGELYEALKDVYVRYCDNSPGYELNGRLITAFSVAYEKRQNN GVWASHPCYKVHFSNDEIRPFSIVKAVRSAAESV
Sequences:
>Translated_114_residues MGKAKSVTIAGKLFKKQGDAISYFTEQKEEQLSSGLIQAGELYEALKDVYVRYCDNSPGYELNGRLITAFSVAYEKRQNN GVWASHPCYKVHFSNDEIRPFSIVKAVRSAAESV >Mature_113_residues GKAKSVTIAGKLFKKQGDAISYFTEQKEEQLSSGLIQAGELYEALKDVYVRYCDNSPGYELNGRLITAFSVAYEKRQNNG VWASHPCYKVHFSNDEIRPFSIVKAVRSAAESV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12744; Mature: 12613
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAKSVTIAGKLFKKQGDAISYFTEQKEEQLSSGLIQAGELYEALKDVYVRYCDNSPGY CCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCE ELNGRLITAFSVAYEKRQNNGVWASHPCYKVHFSNDEIRPFSIVKAVRSAAESV EECCEEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GKAKSVTIAGKLFKKQGDAISYFTEQKEEQLSSGLIQAGELYEALKDVYVRYCDNSPGY CCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCE ELNGRLITAFSVAYEKRQNNGVWASHPCYKVHFSNDEIRPFSIVKAVRSAAESV EECCEEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA