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The map label for this gene is 27363824

Identifier: 27363824

GI number: 27363824

Start: 338959

End: 339471

Strand: Reverse

Name: 27363824

Synonym: VV1_0352

Alternate gene names: NA

Gene position: 339471-338959 (Counterclockwise)

Preceding gene: 27363826

Following gene: 27363823

Centisome position: 10.34

GC content: 42.5

Gene sequence:

>513_bases
ATGACTCGCGGCTTCACACTTTTGGAGCTCTTAATTACAGTGGCTGTACTGGCTGTAATTTTAGCTTGGGCAGTACCTAG
TTTTACTGGTGTTACGAATACAACCAAAATGCAGAGACTAGGAAATGAATTGCATGGCTTTGTTATCCAAGCAAAATCGG
AGGCTGTATTACGTCGACAAAATCTTTGGGCACATATTTCCATCGCAGCTAATGGGGATAGTTTAGGGACTTGGAAAATT
GAACTTACTGACAATGCAACTCCAGGAATTGGTACTGTCTTGCTTAATCTTTCGGGTGCTCCTTACAAAGGAGTATTAGT
TAAATCGCAGTTCCCGTCTGATCAGATCAGTTTTGATGGTGTTTATGGCCGTCCTAGTCAGGGCAACATCCGTTTTTACC
CTACAGGTGAATCTACGAAAGCAATTAAGTTAATTGCGCATAATCGTTCTGCCCGTTTCCGCCTATGTAGTGATAACCAG
AGTGATGAATACTATGGCTACCCTCGTTGCTAA

Upstream 100 bases:

>100_bases
CGAACACTTCCTCGTTGATTTTCCTCCTATTTTTCTATGGTGCTAGCATTGGTGCAAGTTGAATTGTTGCTTAGCAATAG
ATTACATAGGAATTTGGGAA

Downstream 100 bases:

>100_bases
ACAAATTTCTTTTCAACGTAAGAGGCAGTTAGGTGCCTCGTTGGTCGAATTTATGATATCCGCAACTATTGGCTTGTTTG
CATTAGGTGTTGTTGGTTCG

Product: putative Tfp pilus assembly protein FimT

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein FimT; Type 4 Fimbrial Biogenesis Protein FimT

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTRGFTLLELLITVAVLAVILAWAVPSFTGVTNTTKMQRLGNELHGFVIQAKSEAVLRRQNLWAHISIAANGDSLGTWKI
ELTDNATPGIGTVLLNLSGAPYKGVLVKSQFPSDQISFDGVYGRPSQGNIRFYPTGESTKAIKLIAHNRSARFRLCSDNQ
SDEYYGYPRC

Sequences:

>Translated_170_residues
MTRGFTLLELLITVAVLAVILAWAVPSFTGVTNTTKMQRLGNELHGFVIQAKSEAVLRRQNLWAHISIAANGDSLGTWKI
ELTDNATPGIGTVLLNLSGAPYKGVLVKSQFPSDQISFDGVYGRPSQGNIRFYPTGESTKAIKLIAHNRSARFRLCSDNQ
SDEYYGYPRC
>Mature_169_residues
TRGFTLLELLITVAVLAVILAWAVPSFTGVTNTTKMQRLGNELHGFVIQAKSEAVLRRQNLWAHISIAANGDSLGTWKIE
LTDNATPGIGTVLLNLSGAPYKGVLVKSQFPSDQISFDGVYGRPSQGNIRFYPTGESTKAIKLIAHNRSARFRLCSDNQS
DEYYGYPRC

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18664; Mature: 18532

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGFTLLELLITVAVLAVILAWAVPSFTGVTNTTKMQRLGNELHGFVIQAKSEAVLRRQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHC
NLWAHISIAANGDSLGTWKIELTDNATPGIGTVLLNLSGAPYKGVLVKSQFPSDQISFDG
CCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECC
VYGRPSQGNIRFYPTGESTKAIKLIAHNRSARFRLCSDNQSDEYYGYPRC
CCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TRGFTLLELLITVAVLAVILAWAVPSFTGVTNTTKMQRLGNELHGFVIQAKSEAVLRRQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHC
NLWAHISIAANGDSLGTWKIELTDNATPGIGTVLLNLSGAPYKGVLVKSQFPSDQISFDG
CCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECC
VYGRPSQGNIRFYPTGESTKAIKLIAHNRSARFRLCSDNQSDEYYGYPRC
CCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA