| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363822
Identifier: 27363822
GI number: 27363822
Start: 337021
End: 338313
Strand: Reverse
Name: 27363822
Synonym: VV1_0350
Alternate gene names: NA
Gene position: 338313-337021 (Counterclockwise)
Preceding gene: 27363823
Following gene: 27363821
Centisome position: 10.31
GC content: 41.84
Gene sequence:
>1293_bases ATGATAAATCGTGAACAAGGTGCGACGACCTTGCTTGTTACGAGTGTATTGCTGATCGCTGCACTCATGGCGACTTTAGG TAGTTATAAAACATTGCTTTATCAAATCAAACGAGCGCAAAATGAGGTATTGTCACGGCAAAGTTACTGGAAAGCGGAGG GGGGATTGGAGTGCGCGTTTGCGCTTGTCAGACAGCAAGGTGATATTCTTGCTGCAACTACTCTTTTTCCTTCTACGTGT AAAAACCCATTAGGACTGTCTAATCTTGCTATCGATAGCAACAATAAAATTACGAGCAAAGTAGCCTCTAGCGGACATGC GACGATAAGCAAAACTCTTAAACTGAGTCGTGGTGCATCTAGCGGTGCTCTGAAAAGTAGCTCCGATCTCTATATCAACG GTAGTGCTACTTTTTCTACACCTGATCCTGGTGATTTTGATGATGGATGGGAATGTACAGCAATCCGTTACAAAAGTGCA TTTCACTCTAGATCAGGCGCCACTAACCAAGGCGTGATACATGGCAGTGTTCCATATCAAGGCTTCAATCATAAATCTAA AGATTGTAAAGCTTCGCACAAGACCAATATCTCCGCAGATACTGGATATGGTGATGATTTTATTCAGGATGGCGCTCTGG AGCCTTTCTATGATCTTTTCAGAGTGCAGAGATCCAATTGGAGTAGCGTAAAAACTAATCTCAACTTTGCCACTGTAAAT TTTGACAACGTGTTGGATCAGATAGTTACGGATTGTGGAAAAAAAGTGGCTGATCAGATAAACGCAGGTAAGCGAAGAAT ATGGGTAACGGGTTCGTGTGAATTTACGTCTTCCACAAAAATTAATGGTAATTATCCAACCGATTCAAACGGTAACCCGA TTAAAGGTGGGATCGATCATATTTCCGAGGCTTTTGTTAGTTCGGGAGGGGATCCTGTTTTATTACTAGTGCACAACGGC ATTTTTGCTGCACATGGCGCGATGACGTTTCCTGGAATGCTGTATCAACTTCATACAACAGCACCAACTAACTTAGATAC TCTTTGGGATAACTTTGAAGCAAAAGATCATTTTGCAGAGGTTGTTCACTTTACAGGGTTGAGTAAAAACCGAATTGTTT ATTTTCAAAGAGGGGCATTCACTTTCTCTGGAGGGCAAGTTTTAGATAGTCCAAGCTATGCAGCTTACTTCGCAAACTCA CTGAACTTTGCTTTCAATAGAGACAATATAGAAGAGGTGGTTGATCCCGTTATTTTTTACGCATGGGAGAAGGGGAGCTG GAATGATTTGTAA
Upstream 100 bases:
>100_bases CGACGTCAGCTTATTTTGATATTGAATTGATTACGCGCTTGACCGACCTCCCATCCAGTAAAGAAAACGTTTCATTCTCA GTAACGCAGAGGAATTGGCA
Downstream 100 bases:
>100_bases GCAAAGTGGTTTCAGTTTGATAGAAGTGCTGATCTCTTTTCTACTTATTGGTATCGGAGCCTTGGGGTTGATAAAACTTC AAGTGTACATGGAGCGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MINREQGATTLLVTSVLLIAALMATLGSYKTLLYQIKRAQNEVLSRQSYWKAEGGLECAFALVRQQGDILAATTLFPSTC KNPLGLSNLAIDSNNKITSKVASSGHATISKTLKLSRGASSGALKSSSDLYINGSATFSTPDPGDFDDGWECTAIRYKSA FHSRSGATNQGVIHGSVPYQGFNHKSKDCKASHKTNISADTGYGDDFIQDGALEPFYDLFRVQRSNWSSVKTNLNFATVN FDNVLDQIVTDCGKKVADQINAGKRRIWVTGSCEFTSSTKINGNYPTDSNGNPIKGGIDHISEAFVSSGGDPVLLLVHNG IFAAHGAMTFPGMLYQLHTTAPTNLDTLWDNFEAKDHFAEVVHFTGLSKNRIVYFQRGAFTFSGGQVLDSPSYAAYFANS LNFAFNRDNIEEVVDPVIFYAWEKGSWNDL
Sequences:
>Translated_430_residues MINREQGATTLLVTSVLLIAALMATLGSYKTLLYQIKRAQNEVLSRQSYWKAEGGLECAFALVRQQGDILAATTLFPSTC KNPLGLSNLAIDSNNKITSKVASSGHATISKTLKLSRGASSGALKSSSDLYINGSATFSTPDPGDFDDGWECTAIRYKSA FHSRSGATNQGVIHGSVPYQGFNHKSKDCKASHKTNISADTGYGDDFIQDGALEPFYDLFRVQRSNWSSVKTNLNFATVN FDNVLDQIVTDCGKKVADQINAGKRRIWVTGSCEFTSSTKINGNYPTDSNGNPIKGGIDHISEAFVSSGGDPVLLLVHNG IFAAHGAMTFPGMLYQLHTTAPTNLDTLWDNFEAKDHFAEVVHFTGLSKNRIVYFQRGAFTFSGGQVLDSPSYAAYFANS LNFAFNRDNIEEVVDPVIFYAWEKGSWNDL >Mature_430_residues MINREQGATTLLVTSVLLIAALMATLGSYKTLLYQIKRAQNEVLSRQSYWKAEGGLECAFALVRQQGDILAATTLFPSTC KNPLGLSNLAIDSNNKITSKVASSGHATISKTLKLSRGASSGALKSSSDLYINGSATFSTPDPGDFDDGWECTAIRYKSA FHSRSGATNQGVIHGSVPYQGFNHKSKDCKASHKTNISADTGYGDDFIQDGALEPFYDLFRVQRSNWSSVKTNLNFATVN FDNVLDQIVTDCGKKVADQINAGKRRIWVTGSCEFTSSTKINGNYPTDSNGNPIKGGIDHISEAFVSSGGDPVLLLVHNG IFAAHGAMTFPGMLYQLHTTAPTNLDTLWDNFEAKDHFAEVVHFTGLSKNRIVYFQRGAFTFSGGQVLDSPSYAAYFANS LNFAFNRDNIEEVVDPVIFYAWEKGSWNDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46841; Mature: 46841
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINREQGATTLLVTSVLLIAALMATLGSYKTLLYQIKRAQNEVLSRQSYWKAEGGLECAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALVRQQGDILAATTLFPSTCKNPLGLSNLAIDSNNKITSKVASSGHATISKTLKLSRGAS HHHHCCCCEEEEEEECHHHCCCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHCCCCC SGALKSSSDLYINGSATFSTPDPGDFDDGWECTAIRYKSAFHSRSGATNQGVIHGSVPYQ CCCCCCCCCEEEECCEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCEEECCCCCC GFNHKSKDCKASHKTNISADTGYGDDFIQDGALEPFYDLFRVQRSNWSSVKTNLNFATVN CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCHHEECCEEEEEE FDNVLDQIVTDCGKKVADQINAGKRRIWVTGSCEFTSSTKINGNYPTDSNGNPIKGGIDH HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEECCCCEECCCCCCCCCCCCCCCHHHH ISEAFVSSGGDPVLLLVHNGIFAAHGAMTFPGMLYQLHTTAPTNLDTLWDNFEAKDHFAE HHHHHHHCCCCEEEEEEECCEEEECCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHH VVHFTGLSKNRIVYFQRGAFTFSGGQVLDSPSYAAYFANSLNFAFNRDNIEEVVDPVIFY HHHHCCCCCCEEEEEECCEEEECCCCEECCCCHHHHHHCCCCEEECCCCHHHHHCCCEEE AWEKGSWNDL EECCCCCCCC >Mature Secondary Structure MINREQGATTLLVTSVLLIAALMATLGSYKTLLYQIKRAQNEVLSRQSYWKAEGGLECAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALVRQQGDILAATTLFPSTCKNPLGLSNLAIDSNNKITSKVASSGHATISKTLKLSRGAS HHHHCCCCEEEEEEECHHHCCCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHCCCCC SGALKSSSDLYINGSATFSTPDPGDFDDGWECTAIRYKSAFHSRSGATNQGVIHGSVPYQ CCCCCCCCCEEEECCEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCEEECCCCCC GFNHKSKDCKASHKTNISADTGYGDDFIQDGALEPFYDLFRVQRSNWSSVKTNLNFATVN CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCHHEECCEEEEEE FDNVLDQIVTDCGKKVADQINAGKRRIWVTGSCEFTSSTKINGNYPTDSNGNPIKGGIDH HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEECCCCEECCCCCCCCCCCCCCCHHHH ISEAFVSSGGDPVLLLVHNGIFAAHGAMTFPGMLYQLHTTAPTNLDTLWDNFEAKDHFAE HHHHHHHCCCCEEEEEEECCEEEECCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHH VVHFTGLSKNRIVYFQRGAFTFSGGQVLDSPSYAAYFANSLNFAFNRDNIEEVVDPVIFY HHHHCCCCCCEEEEEECCEEEECCCCEECCCCHHHHHHCCCCEEECCCCHHHHHCCCEEE AWEKGSWNDL EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA