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The map label for this gene is sirB2 [H]

Identifier: 27363732

GI number: 27363732

Start: 244734

End: 245117

Strand: Reverse

Name: sirB2 [H]

Synonym: VV1_0251

Alternate gene names: 27363732

Gene position: 245117-244734 (Counterclockwise)

Preceding gene: 27363733

Following gene: 27363731

Centisome position: 7.47

GC content: 42.71

Gene sequence:

>384_bases
ATGTACGAAGCTCTGAAATACTTTCATTTACTCACCATTGTCATCAGCGCGTTGCTGCTTTCCGTTCGCTATGCATTGAT
GATGATGAATTCAAATAAGTTGAAGCACCCATTTTTACAGCGTTTTCCTCATATCAACGATTCATTATTGTTACTCTCAG
GAATCGCATTGATTGTGATGACCGGATTTATTCCTTTTACCCCATCAGCGCCGTGGTTAACTGAGAAGCTCACTTGCGTA
ATGGCTTACATTGCCCTTGGCTTCTTTGCGCTTAAACTGGGTAAAAACAAGCTGCTACGTACTTTCTCTTTCTTTGGTGC
ACTCGGTTGGCTAGCGATGGCAGGCAAATTGGCGGTTTCAAAGACACCGATGTTTTTCGGTTAA

Upstream 100 bases:

>100_bases
CCGAAAAGGATTACGGTGGCAATGATCGAGTGACTTTGGGTTACTTCGTTGCTTTACCAGAAAACACGGATCACTAGATC
CAGATATCAAAGAGAACACT

Downstream 100 bases:

>100_bases
GAATATTTAGTGTGAATTAAGGAAACGGATAACAAGTAATGCTGGAATTGTTTGACGAAGATTTTGACAACATGGAGCTG
GTGGAAGGGGCGTTAGAGCT

Product: protein sirB2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYEALKYFHLLTIVISALLLSVRYALMMMNSNKLKHPFLQRFPHINDSLLLLSGIALIVMTGFIPFTPSAPWLTEKLTCV
MAYIALGFFALKLGKNKLLRTFSFFGALGWLAMAGKLAVSKTPMFFG

Sequences:

>Translated_127_residues
MYEALKYFHLLTIVISALLLSVRYALMMMNSNKLKHPFLQRFPHINDSLLLLSGIALIVMTGFIPFTPSAPWLTEKLTCV
MAYIALGFFALKLGKNKLLRTFSFFGALGWLAMAGKLAVSKTPMFFG
>Mature_127_residues
MYEALKYFHLLTIVISALLLSVRYALMMMNSNKLKHPFLQRFPHINDSLLLLSGIALIVMTGFIPFTPSAPWLTEKLTCV
MAYIALGFFALKLGKNKLLRTFSFFGALGWLAMAGKLAVSKTPMFFG

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787464, Length=125, Percent_Identity=37.6, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007360 [H]

Pfam domain/function: PF04247 SirB [H]

EC number: NA

Molecular weight: Translated: 14254; Mature: 14254

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEALKYFHLLTIVISALLLSVRYALMMMNSNKLKHPFLQRFPHINDSLLLLSGIALIVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH
TGFIPFTPSAPWLTEKLTCVMAYIALGFFALKLGKNKLLRTFSFFGALGWLAMAGKLAVS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTPMFFG
CCCCCCC
>Mature Secondary Structure
MYEALKYFHLLTIVISALLLSVRYALMMMNSNKLKHPFLQRFPHINDSLLLLSGIALIVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH
TGFIPFTPSAPWLTEKLTCVMAYIALGFFALKLGKNKLLRTFSFFGALGWLAMAGKLAVS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTPMFFG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7543480; 8905232; 9278503 [H]