Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

Click here to switch to the map view.

The map label for this gene is 27363680

Identifier: 27363680

GI number: 27363680

Start: 187706

End: 188440

Strand: Reverse

Name: 27363680

Synonym: VV1_0198

Alternate gene names: NA

Gene position: 188440-187706 (Counterclockwise)

Preceding gene: 27363686

Following gene: 27363679

Centisome position: 5.74

GC content: 49.66

Gene sequence:

>735_bases
ATGAATGCAATCATAGCGTTACTTAAAGCGTTTGCGGCAAGTGCGAGAGATTTGTTGCCCATTGTTGTGGTGATTGTTTT
CTTTCAAATCGTTGTACTCAAAGAGCCATTACCCAATATTTTGTCCATCGGCTTTGGTCTTGTTCTTGTGATCCTCGGTT
TGACCTTTTTTATCTTTGGGTTAGAAATGGGGCTCTTTCCCATTGGTGAATCGATGGCGCAAGCTTTTGCGAGAAAAGGC
AGTGTGTTTTGGTTGATGGTTTTTGCGTTTTGTCTTGGTTTTGGTACGACGATCGCAGAGCCCGCCTTGACCGCGGTCGC
CAATGAAGCGGCAGAAGTCGCGGCGGAAGGCGGCATGATCGCCCATACAGAAGACTCTATGGAAGAGTATGCCAACGGCT
TGCGTTTAACCGTAGCGTTGTCAGTTGGGGCTGCGATAGTACTTGGCGTACTGCGCATCTTAAAAGGTTGGCCGATTCAC
TATTTGATTATTGGTGGCTACATTGGCGTGGTGGTGCTGACGGGGTTTGCTCCGGAAACCATTATCGGCATCGCATACGA
TTCGGGAGGCGTCACGACGTCGACCATCACTGTTCCCCTTGTGACGGCGTTGGGGGTGGGGCTCGCTTCATCCATTAAGG
GGCGAAACCCGATGATTGATGGTTTTGGCTTAATTGCGTTTGCCTCCTTATTGCCCATGATGTTCGTCATGATCTACGGC
ATGGTGGTGGCATGA

Upstream 100 bases:

>100_bases
AAATGTAACCAATTATTACTGTGCTTTTCACACGAATCACATCGCAACGAAAAAAACTCTGCAATGATTACAACAAGGAC
AATCACACTAAGGACAGCGG

Downstream 100 bases:

>100_bases
TTGAGTTCGAACGCTTTACCGACACTTTAACCACCACCGTATTGGATGTTGTCCCCATAGCGGTGATCATTTTTGGCTTT
CAATTTGCCATTTTACGCAA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNAIIALLKAFAASARDLLPIVVVIVFFQIVVLKEPLPNILSIGFGLVLVILGLTFFIFGLEMGLFPIGESMAQAFARKG
SVFWLMVFAFCLGFGTTIAEPALTAVANEAAEVAAEGGMIAHTEDSMEEYANGLRLTVALSVGAAIVLGVLRILKGWPIH
YLIIGGYIGVVVLTGFAPETIIGIAYDSGGVTTSTITVPLVTALGVGLASSIKGRNPMIDGFGLIAFASLLPMMFVMIYG
MVVA

Sequences:

>Translated_244_residues
MNAIIALLKAFAASARDLLPIVVVIVFFQIVVLKEPLPNILSIGFGLVLVILGLTFFIFGLEMGLFPIGESMAQAFARKG
SVFWLMVFAFCLGFGTTIAEPALTAVANEAAEVAAEGGMIAHTEDSMEEYANGLRLTVALSVGAAIVLGVLRILKGWPIH
YLIIGGYIGVVVLTGFAPETIIGIAYDSGGVTTSTITVPLVTALGVGLASSIKGRNPMIDGFGLIAFASLLPMMFVMIYG
MVVA
>Mature_244_residues
MNAIIALLKAFAASARDLLPIVVVIVFFQIVVLKEPLPNILSIGFGLVLVILGLTFFIFGLEMGLFPIGESMAQAFARKG
SVFWLMVFAFCLGFGTTIAEPALTAVANEAAEVAAEGGMIAHTEDSMEEYANGLRLTVALSVGAAIVLGVLRILKGWPIH
YLIIGGYIGVVVLTGFAPETIIGIAYDSGGVTTSTITVPLVTALGVGLASSIKGRNPMIDGFGLIAFASLLPMMFVMIYG
MVVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25546; Mature: 25546

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIIALLKAFAASARDLLPIVVVIVFFQIVVLKEPLPNILSIGFGLVLVILGLTFFIFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LEMGLFPIGESMAQAFARKGSVFWLMVFAFCLGFGTTIAEPALTAVANEAAEVAAEGGMI
HHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE
AHTEDSMEEYANGLRLTVALSVGAAIVLGVLRILKGWPIHYLIIGGYIGVVVLTGFAPET
ECCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
IIGIAYDSGGVTTSTITVPLVTALGVGLASSIKGRNPMIDGFGLIAFASLLPMMFVMIYG
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MVVA
HHCC
>Mature Secondary Structure
MNAIIALLKAFAASARDLLPIVVVIVFFQIVVLKEPLPNILSIGFGLVLVILGLTFFIFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LEMGLFPIGESMAQAFARKGSVFWLMVFAFCLGFGTTIAEPALTAVANEAAEVAAEGGMI
HHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE
AHTEDSMEEYANGLRLTVALSVGAAIVLGVLRILKGWPIHYLIIGGYIGVVVLTGFAPET
ECCHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
IIGIAYDSGGVTTSTITVPLVTALGVGLASSIKGRNPMIDGFGLIAFASLLPMMFVMIYG
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MVVA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA