| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is pgm [H]
Identifier: 27363652
GI number: 27363652
Start: 159086
End: 160735
Strand: Reverse
Name: pgm [H]
Synonym: VV1_0169
Alternate gene names: 27363652
Gene position: 160735-159086 (Counterclockwise)
Preceding gene: 27363653
Following gene: 27363651
Centisome position: 4.9
GC content: 48.3
Gene sequence:
>1650_bases ATGGCTATGCACCCTCGTGCAGGGCAGAAAGCTCTGCAAGAAGATCTTCACAATATCCCAGCACTCGTTGCTAATTATTT CCTCCTTCAACCCGATCCAACAAACCCAGCACACAAAGTCGAGTTTGGTACGTCAGGGCATCGTGGTTGTGCGGATAAAT CCACTTTTAACGAACATCATATTTTAGCGATTGCTCAAGCAGTGGCTGAAGTACGCGCAGAGCAAGGGACAACGGGTCCT CTTTTTGTGGGTAAAGATACGCATGCGTTGTCTGAGCCAGCGTTTTCTACCGTTGTTGAAGTGCTGATTGCCAATGGCGT GACCGTGATTGTACAAGAACAAAATGGCTATACCCCAACTCCGGGTATTTCTCATGCGATCCTGACATACAACTTACAAC ACGAAGAAAAAGCAGACGGTATTGTGATCACTCCGTCTCATAACCCACCACAAGATGGCGGTATCAAATACAATCCGACT CATGGTGGCCCCGCTGAAGGCGAGCTAACACAGCGAATTGAGAATCGTGCAAACGTACTCATCGCAGAGGGGTTGCAGGG TGTTAAGCGTATGCCTTTGGCGCAAGCAAAAGCGTCATCGCTGTTTGTAGAGCAAGATCTGGTCAAACCTTATGTCGATG ACTTGGTGAATGTAATCGATATGGCTGCCATCCAAAAAGCAGGCCTGAAACTGGGTGTCGATCCTCTTGGCGGCAGTGGC ATTGATTATTGGCGTCAGATTGGTAAAGCATACAATTTAGATCTTACTTTAGTGAGTGAAGCCATTGACCCTTCTTTCCA GTTTATGTCATTGGATAAAGATGGTGTGGTGCGTATGGACTGCTCTTCTCCCTACGCAATGGCTGGATTGCTGGCGCTAA AAGATCAGTATGATCTCGCGTTTGGCAATGACCCAGATTACGATCGCCATGGTATTGTCACGCCAACAAAAGGCTTGATG AATCCGAACCACTTCTTAGCTGTTTGTATTGATTATCTATACCGTCATCGTCAAGGTTGGGCTGCGGATGTGGCAGTGGG TAAAACCCTAGTTTCTAGCGCCATGATTGACCGAGTGGTGGCCGATCTTGGCCGTGAGCTATGTGAAGTACCGGTTGGCT TCAAATGGTTTGTGGATGGGTTGTACAACGGTAAGTTTGGCTTTGGTGGCGAAGAGAGTGCGGGAGCCTCATTCTTGCGC CAAGATGGTACACCATGGTCGACAGACAAAGATGGCATCATTCTCTGTTTACTGGCTGCGGAAATCACCGCAGTGACCGG TAAAAACCCGCAGCAATATTACGACGAGCTGGCGGCTAAACATGGGGAGTCTCAGTACAGCCGAATCCAAGCGGTTGCCA ATGGTCCTCAGAAAGAGGTACTGAAGAAGCTCTCTGCTGAAATGGTGAAGGCAGAAACTTTAGCAGGTGATGAGATTACC GCGAGACTGACCCATGCTCCTGGTAATGGCGCAGCGATTGGTGGTCTAAAAGTGACAACTGCGAACGGTTGGTTTGCTGC GCGTCCATCGGGTACTGAAGATATCTATAAGATCTATTGTGAGAGCTTCAAAGGCGCAGAGCACCTCAAACAAATTGAGT TGGAAGCGCAAGAGATTGTCAATCAAGTCTTTGCCGAAGCAGGTCTATAA
Upstream 100 bases:
>100_bases TTCAATTTAAGAAACCTGATAGAAGCCTCATAATGCGCAAGATTATGCCGATATTATGAGGCTTTTTTGTTTGAGTATAT TTTAAGAAAGGATGTCATTA
Downstream 100 bases:
>100_bases TTCTTTACGGCTGATAATGGCTTTCCAATGATAATTAAAATCCCAAACACAGTGTTTGGGATTTTTATTGTCGGAATAAA ATTAAATTCATATGTCGAAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MAMHPRAGQKALQEDLHNIPALVANYFLLQPDPTNPAHKVEFGTSGHRGCADKSTFNEHHILAIAQAVAEVRAEQGTTGP LFVGKDTHALSEPAFSTVVEVLIANGVTVIVQEQNGYTPTPGISHAILTYNLQHEEKADGIVITPSHNPPQDGGIKYNPT HGGPAEGELTQRIENRANVLIAEGLQGVKRMPLAQAKASSLFVEQDLVKPYVDDLVNVIDMAAIQKAGLKLGVDPLGGSG IDYWRQIGKAYNLDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDQYDLAFGNDPDYDRHGIVTPTKGLM NPNHFLAVCIDYLYRHRQGWAADVAVGKTLVSSAMIDRVVADLGRELCEVPVGFKWFVDGLYNGKFGFGGEESAGASFLR QDGTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGESQYSRIQAVANGPQKEVLKKLSAEMVKAETLAGDEIT ARLTHAPGNGAAIGGLKVTTANGWFAARPSGTEDIYKIYCESFKGAEHLKQIELEAQEIVNQVFAEAGL
Sequences:
>Translated_549_residues MAMHPRAGQKALQEDLHNIPALVANYFLLQPDPTNPAHKVEFGTSGHRGCADKSTFNEHHILAIAQAVAEVRAEQGTTGP LFVGKDTHALSEPAFSTVVEVLIANGVTVIVQEQNGYTPTPGISHAILTYNLQHEEKADGIVITPSHNPPQDGGIKYNPT HGGPAEGELTQRIENRANVLIAEGLQGVKRMPLAQAKASSLFVEQDLVKPYVDDLVNVIDMAAIQKAGLKLGVDPLGGSG IDYWRQIGKAYNLDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDQYDLAFGNDPDYDRHGIVTPTKGLM NPNHFLAVCIDYLYRHRQGWAADVAVGKTLVSSAMIDRVVADLGRELCEVPVGFKWFVDGLYNGKFGFGGEESAGASFLR QDGTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGESQYSRIQAVANGPQKEVLKKLSAEMVKAETLAGDEIT ARLTHAPGNGAAIGGLKVTTANGWFAARPSGTEDIYKIYCESFKGAEHLKQIELEAQEIVNQVFAEAGL >Mature_548_residues AMHPRAGQKALQEDLHNIPALVANYFLLQPDPTNPAHKVEFGTSGHRGCADKSTFNEHHILAIAQAVAEVRAEQGTTGPL FVGKDTHALSEPAFSTVVEVLIANGVTVIVQEQNGYTPTPGISHAILTYNLQHEEKADGIVITPSHNPPQDGGIKYNPTH GGPAEGELTQRIENRANVLIAEGLQGVKRMPLAQAKASSLFVEQDLVKPYVDDLVNVIDMAAIQKAGLKLGVDPLGGSGI DYWRQIGKAYNLDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDQYDLAFGNDPDYDRHGIVTPTKGLMN PNHFLAVCIDYLYRHRQGWAADVAVGKTLVSSAMIDRVVADLGRELCEVPVGFKWFVDGLYNGKFGFGGEESAGASFLRQ DGTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGESQYSRIQAVANGPQKEVLKKLSAEMVKAETLAGDEITA RLTHAPGNGAAIGGLKVTTANGWFAARPSGTEDIYKIYCESFKGAEHLKQIELEAQEIVNQVFAEAGL
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=440, Percent_Identity=25, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI290463102, Length=479, Percent_Identity=25.8872651356994, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI21361621, Length=470, Percent_Identity=25.1063829787234, Blast_Score=86, Evalue=7e-17, Organism=Escherichia coli, GI1786904, Length=547, Percent_Identity=70.018281535649, Blast_Score=785, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=448, Percent_Identity=27.2321428571429, Blast_Score=89, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323752, Length=573, Percent_Identity=26.7015706806283, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6322722, Length=495, Percent_Identity=28.6868686868687, Blast_Score=103, Evalue=6e-23, Organism=Drosophila melanogaster, GI17864244, Length=469, Percent_Identity=26.0127931769723, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59233; Mature: 59101
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMHPRAGQKALQEDLHNIPALVANYFLLQPDPTNPAHKVEFGTSGHRGCADKSTFNEHH CCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHH ILAIAQAVAEVRAEQGTTGPLFVGKDTHALSEPAFSTVVEVLIANGVTVIVQEQNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCC PGISHAILTYNLQHEEKADGIVITPSHNPPQDGGIKYNPTHGGPAEGELTQRIENRANVL CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCEE IAEGLQGVKRMPLAQAKASSLFVEQDLVKPYVDDLVNVIDMAAIQKAGLKLGVDPLGGSG EHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCC IDYWRQIGKAYNLDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDQYDLA HHHHHHHCHHCCCEEEEEHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEE FGNDPDYDRHGIVTPTKGLMNPNHFLAVCIDYLYRHRQGWAADVAVGKTLVSSAMIDRVV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ADLGRELCEVPVGFKWFVDGLYNGKFGFGGEESAGASFLRQDGTPWSTDKDGIILCLLAA HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEH EITAVTGKNPQQYYDELAAKHGESQYSRIQAVANGPQKEVLKKLSAEMVKAETLAGDEIT HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEE ARLTHAPGNGAAIGGLKVTTANGWFAARPSGTEDIYKIYCESFKGAEHLKQIELEAQEIV EEEEECCCCCCEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NQVFAEAGL HHHHHHCCC >Mature Secondary Structure AMHPRAGQKALQEDLHNIPALVANYFLLQPDPTNPAHKVEFGTSGHRGCADKSTFNEHH CCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCHH ILAIAQAVAEVRAEQGTTGPLFVGKDTHALSEPAFSTVVEVLIANGVTVIVQEQNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCC PGISHAILTYNLQHEEKADGIVITPSHNPPQDGGIKYNPTHGGPAEGELTQRIENRANVL CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCEE IAEGLQGVKRMPLAQAKASSLFVEQDLVKPYVDDLVNVIDMAAIQKAGLKLGVDPLGGSG EHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCC IDYWRQIGKAYNLDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDQYDLA HHHHHHHCHHCCCEEEEEHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEE FGNDPDYDRHGIVTPTKGLMNPNHFLAVCIDYLYRHRQGWAADVAVGKTLVSSAMIDRVV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ADLGRELCEVPVGFKWFVDGLYNGKFGFGGEESAGASFLRQDGTPWSTDKDGIILCLLAA HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEH EITAVTGKNPQQYYDELAAKHGESQYSRIQAVANGPQKEVLKKLSAEMVKAETLAGDEIT HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEE ARLTHAPGNGAAIGGLKVTTANGWFAARPSGTEDIYKIYCESFKGAEHLKQIELEAQEIV EEEEECCCCCCEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NQVFAEAGL HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]