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The map label for this gene is yecM [H]

Identifier: 27363627

GI number: 27363627

Start: 128834

End: 129430

Strand: Reverse

Name: yecM [H]

Synonym: VV1_0144

Alternate gene names: 27363627

Gene position: 129430-128834 (Counterclockwise)

Preceding gene: 27363630

Following gene: 27363625

Centisome position: 3.94

GC content: 48.41

Gene sequence:

>597_bases
ATGAGTAATTTGCTGGCAGAAAAACGCCTGACACCCCAACAGATGCTAGAGGATTTACCCGGTTTCATGCAGAAAATCGA
GTCGCTGGCCGATTTATTGCAACTGGATTTGAGTTTTGCTCAAGCGGATCATATTGCGCTACGCGTAAACGAGAATCAAA
CCGCTCAGTTGTCTCAGCAAATGTGGAGTGAACAAGGCAAAGTGATCTCACAGGCGAACATCAATGGTCGTCCGATCATT
GTGATCGAGTTTGATGCGCCACTGGCCAGTCGCGGTTGGAAAATCGAATGCTTAGAGCTGCCTTATCCGGCAGAAGGAAA
AGCGTATCCCCAAGAAGGTTGGGAACATGTAGAGTTTGTCGTCCCATCTCATGCTCAAACGGCCGAAGACTATTTGGCGG
ATTTGAAACACACCTATCCAGCGTTTGGCGCTCAGTTTAGCAAACTCGAGGAACTGGGGGTTAAGGTGAAGTTGTCGAGT
CCAAAGGGGGAAGGTGAGCGGTTGAACAATCCGACGGTTGCGTTCAAGTACCAAGGCATTTGCATCAAGCTGCACCCACA
TTCTTTAAAACGTATTGTTGAGTCTGAGCAAGCCTAG

Upstream 100 bases:

>100_bases
GTGAAATTTTGACTTTTTATTAAAGTACTCGCAGGACTGCCAATTTTGCCTGAAGTTGTTACTATGACGCCCAGAAATAA
AAAGTGTGAAGAGAACGAAA

Downstream 100 bases:

>100_bases
CTACGCAGAAAAAAACAAAGGGTTGCAATCATTGCAACCCTTTTAGTTCGCTGTATTCCATGCTTAAAGAATGACGGTTT
TGTTGCCATACACAAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSNLLAEKRLTPQQMLEDLPGFMQKIESLADLLQLDLSFAQADHIALRVNENQTAQLSQQMWSEQGKVISQANINGRPII
VIEFDAPLASRGWKIECLELPYPAEGKAYPQEGWEHVEFVVPSHAQTAEDYLADLKHTYPAFGAQFSKLEELGVKVKLSS
PKGEGERLNNPTVAFKYQGICIKLHPHSLKRIVESEQA

Sequences:

>Translated_198_residues
MSNLLAEKRLTPQQMLEDLPGFMQKIESLADLLQLDLSFAQADHIALRVNENQTAQLSQQMWSEQGKVISQANINGRPII
VIEFDAPLASRGWKIECLELPYPAEGKAYPQEGWEHVEFVVPSHAQTAEDYLADLKHTYPAFGAQFSKLEELGVKVKLSS
PKGEGERLNNPTVAFKYQGICIKLHPHSLKRIVESEQA
>Mature_197_residues
SNLLAEKRLTPQQMLEDLPGFMQKIESLADLLQLDLSFAQADHIALRVNENQTAQLSQQMWSEQGKVISQANINGRPIIV
IEFDAPLASRGWKIECLELPYPAEGKAYPQEGWEHVEFVVPSHAQTAEDYLADLKHTYPAFGAQFSKLEELGVKVKLSSP
KGEGERLNNPTVAFKYQGICIKLHPHSLKRIVESEQA

Specific function: Unknown

COG id: COG3102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1582/HI_1581 [H]

Homologues:

Organism=Escherichia coli, GI87081996, Length=190, Percent_Identity=38.9473684210526, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010393 [H]

Pfam domain/function: PF06185 YecM [H]

EC number: NA

Molecular weight: Translated: 22237; Mature: 22105

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLLAEKRLTPQQMLEDLPGFMQKIESLADLLQLDLSFAQADHIALRVNENQTAQLSQQ
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MWSEQGKVISQANINGRPIIVIEFDAPLASRGWKIECLELPYPAEGKAYPQEGWEHVEFV
HHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEE
VPSHAQTAEDYLADLKHTYPAFGAQFSKLEELGVKVKLSSPKGEGERLNNPTVAFKYQGI
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCE
CIKLHPHSLKRIVESEQA
EEEECHHHHHHHHHHCCC
>Mature Secondary Structure 
SNLLAEKRLTPQQMLEDLPGFMQKIESLADLLQLDLSFAQADHIALRVNENQTAQLSQQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MWSEQGKVISQANINGRPIIVIEFDAPLASRGWKIECLELPYPAEGKAYPQEGWEHVEFV
HHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEE
VPSHAQTAEDYLADLKHTYPAFGAQFSKLEELGVKVKLSSPKGEGERLNNPTVAFKYQGI
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCE
CIKLHPHSLKRIVESEQA
EEEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]