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The map label for this gene is yeaY [H]

Identifier: 27363621

GI number: 27363621

Start: 123895

End: 124449

Strand: Reverse

Name: yeaY [H]

Synonym: VV1_0138

Alternate gene names: 27363621

Gene position: 124449-123895 (Counterclockwise)

Preceding gene: 27363622

Following gene: 27363620

Centisome position: 3.79

GC content: 46.85

Gene sequence:

>555_bases
ATGAAGAAAACGGTCCGCTCTCTTTTCGCAATGATCGCTTTGCTCGGCTTGGCGGCGTGTAGTTCTCTCCCACAAGAGCT
GACGGCGCAAAACCAAGAAGTGCTAACGGATTATAAAATCTTTGCAGAAAGCCAAGGCGTGGTGACGCAAGATGTTCGTT
TGGGTGGCGTGATTGCTAAAGTGGACAATCTCAAAGACAAAACGCGCATTGAAATTGTTAACTTGCCGATCGATAAAAAC
GGCAAGCCCGACATTAGCCAAGAACCCAATGGACGTTTTGTTGCCTACCTTGAGGGCTACTTAGAGCCCGTTGCGTTTAG
TCAAGGACGTTTGATTACCGTTGTCGGCACTGCTGCAGGGGAAGAGCAAGGCAAAATCGGCGAGTATGATTATGTTTTTC
CAGTGGTGAAGAGCTACGGTTATCGCCTTTGGACCATCGAAGAAAGAGTGAGAGTGTATGACACTTCAAGTTACCTCTAC
CCGTGTTATTCGATTACTTGTCGACAAATGCGCGACTTCCCGCGTGACGGTAAAATCATTCAAGATGTTAAATAA

Upstream 100 bases:

>100_bases
TGAATCAAGCCAAAAGAGAGGAACTCGCCCAGTTGCTCGGTGTCGATATCTACATTTGACCCTTTTGTTGCTTTGATGAC
TGAAGACAGGCAGGTAAATA

Downstream 100 bases:

>100_bases
TGCGTGAGACGCGTTATGTTATCGCCAGTGGAACGCTGGCAGCAATCGAGTATGGTGACGTAAAAACGGCTGATTTATCA
GTCGTTTTTCTTCATGGCTG

Product: Starvation lipoprotein Slp-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKTVRSLFAMIALLGLAACSSLPQELTAQNQEVLTDYKIFAESQGVVTQDVRLGGVIAKVDNLKDKTRIEIVNLPIDKN
GKPDISQEPNGRFVAYLEGYLEPVAFSQGRLITVVGTAAGEEQGKIGEYDYVFPVVKSYGYRLWTIEERVRVYDTSSYLY
PCYSITCRQMRDFPRDGKIIQDVK

Sequences:

>Translated_184_residues
MKKTVRSLFAMIALLGLAACSSLPQELTAQNQEVLTDYKIFAESQGVVTQDVRLGGVIAKVDNLKDKTRIEIVNLPIDKN
GKPDISQEPNGRFVAYLEGYLEPVAFSQGRLITVVGTAAGEEQGKIGEYDYVFPVVKSYGYRLWTIEERVRVYDTSSYLY
PCYSITCRQMRDFPRDGKIIQDVK
>Mature_184_residues
MKKTVRSLFAMIALLGLAACSSLPQELTAQNQEVLTDYKIFAESQGVVTQDVRLGGVIAKVDNLKDKTRIEIVNLPIDKN
GKPDISQEPNGRFVAYLEGYLEPVAFSQGRLITVVGTAAGEEQGKIGEYDYVFPVVKSYGYRLWTIEERVRVYDTSSYLY
PCYSITCRQMRDFPRDGKIIQDVK

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=150, Percent_Identity=32.6666666666667, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87082278, Length=166, Percent_Identity=34.3373493975904, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20701; Mature: 20701

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVRSLFAMIALLGLAACSSLPQELTAQNQEVLTDYKIFAESQGVVTQDVRLGGVIAK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHEEECCCCCEEECEECCEEEEE
VDNLKDKTRIEIVNLPIDKNGKPDISQEPNGRFVAYLEGYLEPVAFSQGRLITVVGTAAG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHCHHCCCCCCEEEEEECCCC
EEQGKIGEYDYVFPVVKSYGYRLWTIEERVRVYDTSSYLYPCYSITCRQMRDFPRDGKII
CCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEHHHHHHHHHHHCCCCCCCEE
QDVK
CCCC
>Mature Secondary Structure
MKKTVRSLFAMIALLGLAACSSLPQELTAQNQEVLTDYKIFAESQGVVTQDVRLGGVIAK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHEEECCCCCEEECEECCEEEEE
VDNLKDKTRIEIVNLPIDKNGKPDISQEPNGRFVAYLEGYLEPVAFSQGRLITVVGTAAG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHCHHCCCCCCEEEEEECCCC
EEQGKIGEYDYVFPVVKSYGYRLWTIEERVRVYDTSSYLYPCYSITCRQMRDFPRDGKII
CCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEHHHHHHHHHHHCCCCCCCEE
QDVK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]