| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363585
Identifier: 27363585
GI number: 27363585
Start: 93042
End: 93575
Strand: Reverse
Name: 27363585
Synonym: VV1_0101
Alternate gene names: NA
Gene position: 93575-93042 (Counterclockwise)
Preceding gene: 27363586
Following gene: 27363584
Centisome position: 2.85
GC content: 49.44
Gene sequence:
>534_bases ATGGCTCAAGAAGAACGCAACCTAAATCAGATTCTTGATGCAATGGTGGCGGGGTTTAGCACTCGTTATACAGAGCGCAA CGTAAGCCGCAACTGGCAAGACAGAAGCGCCTACAAAAATAGCGACTTGGAGCGCGGAGAGCTCACTGTGATCTATATAG GTGAGATCCCCAATGACGCCTACAACACCTATATCAAGCTGCTGGTGATCGGCCGTATTTACTGTGGCTCCAAAGCCAAA GGGCTTGATGTTGAGAGAGCTGAACTCGAGTTCTTGCAAGAGTGGCGAAACTTCTGCAACTCAAGTGCGTTCGGCAATAT CTCGATCCTGTCTGTTTCCACGTCTCAGCAACAGGAGGCACCGGATGGTTGGTTTATCTCTGAATGTCGAGCAGGCCCAT TTGATTTAGCCGGCGAAATAGATTGGCTACCTGTTGGGCCAAGTGAGTTGCCAGAGGAGATATCCGTTTCGCAATCGCCG GATGTCGGCTTTGGCCATGAAGACGATTATTTCTCTGTGGACGAGAATTTCTAA
Upstream 100 bases:
>100_bases TTTACGACAGAGCGGCAGAGCAAACTCAAGACAAAGTGTCTGACATTCTCAATGCCTCGGTGCAGATGGCATTGAGTCGA GCAGGATTAAGGAGTGTGTG
Downstream 100 bases:
>100_bases TGAGTCATACGCCTTCGCAACTTGTTCGCCTTCTCAGTGAAATGATCCAGTTTGGCACCATCATCGAAGTGCAAGCTAAG CCGCTGCGCTACAAAGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAQEERNLNQILDAMVAGFSTRYTERNVSRNWQDRSAYKNSDLERGELTVIYIGEIPNDAYNTYIKLLVIGRIYCGSKAK GLDVERAELEFLQEWRNFCNSSAFGNISILSVSTSQQQEAPDGWFISECRAGPFDLAGEIDWLPVGPSELPEEISVSQSP DVGFGHEDDYFSVDENF
Sequences:
>Translated_177_residues MAQEERNLNQILDAMVAGFSTRYTERNVSRNWQDRSAYKNSDLERGELTVIYIGEIPNDAYNTYIKLLVIGRIYCGSKAK GLDVERAELEFLQEWRNFCNSSAFGNISILSVSTSQQQEAPDGWFISECRAGPFDLAGEIDWLPVGPSELPEEISVSQSP DVGFGHEDDYFSVDENF >Mature_176_residues AQEERNLNQILDAMVAGFSTRYTERNVSRNWQDRSAYKNSDLERGELTVIYIGEIPNDAYNTYIKLLVIGRIYCGSKAKG LDVERAELEFLQEWRNFCNSSAFGNISILSVSTSQQQEAPDGWFISECRAGPFDLAGEIDWLPVGPSELPEEISVSQSPD VGFGHEDDYFSVDENF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20008; Mature: 19877
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEERNLNQILDAMVAGFSTRYTERNVSRNWQDRSAYKNSDLERGELTVIYIGEIPNDA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCHH YNTYIKLLVIGRIYCGSKAKGLDVERAELEFLQEWRNFCNSSAFGNISILSVSTSQQQEA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCC PDGWFISECRAGPFDLAGEIDWLPVGPSELPEEISVSQSPDVGFGHEDDYFSVDENF CCCCCHHHCCCCCCCCCCCCEEEECCHHHCHHHCCCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure AQEERNLNQILDAMVAGFSTRYTERNVSRNWQDRSAYKNSDLERGELTVIYIGEIPNDA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCHH YNTYIKLLVIGRIYCGSKAKGLDVERAELEFLQEWRNFCNSSAFGNISILSVSTSQQQEA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCC PDGWFISECRAGPFDLAGEIDWLPVGPSELPEEISVSQSPDVGFGHEDDYFSVDENF CCCCCHHHCCCCCCCCCCCCEEEECCHHHCHHHCCCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA