| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363579
Identifier: 27363579
GI number: 27363579
Start: 90462
End: 91322
Strand: Reverse
Name: 27363579
Synonym: VV1_0095
Alternate gene names: NA
Gene position: 91322-90462 (Counterclockwise)
Preceding gene: 27363580
Following gene: 27363578
Centisome position: 2.78
GC content: 50.41
Gene sequence:
>861_bases TTGAGTCAGATTGAAATTCCTCAGCTACCGCCACCGGAAGTGGTGAAACAACTCGATGCAGCAAGCATTCGAGCGCGCAT GCTTAATCGCTATGCGCAGCTGATGGGTATCGATGCTCCAAAAGTGGGAGACCCACTCTACAACGCTTTTTCCGCTATGT CTGAAGAAGTGACACGTGCTAGGCAAGAATTCCAAGACATGAGCTTGGATAACATGGTGGCATTTTCCGGTGGCGCGAAT TTACAGCACTTAGGCGCTGCTCGCCCAGTTGAAAAATATGACACTGAAACGGATGAGCAATATCGCCGCCGCGTTCAGAT GGCACCGGAAGGATTCAGTACTGCAGGGCCAGATGGCGCTTATATTTTCCACGCTTTGAATGCCCATGAAGATGTGCTCG ATGCTTTCCCGCTTAACCCCATTGATCTGCAAATTCACCTTTATATCCTCAGTCGTAAAGATGAGGGTGTGGCGACACCA GAGCTCTGCCAGATTGTTTTTGACAACCTCGATGCGCAAACCAAAAGGCCATTAAGCGATCGGCTATTTGTGCTACCTGC TGAAATTTCCCGTTACCGAATAGAAGTTGCCCTGCATATGCCGACTGGCCCTGGCGAGCAACAAACGCTCCAGTTGGCAC AGCAGCGTTTACAAAAGTTGGCAGATGATGCACACCGCTTGGGTGGCGATGTCTCGTTTTCCGCCATTTACGCTGCTGCC CACGTAAAGCGCGACAGTGTAGACAGCGTTTACCAACCTGTTTCAAAAGTTGAGCTGATTGCCCCGCAGGAAGAGATCGC CTGCTCCAAATCGCAAGCGCCATATTGCTATGAAATTGTGGTGAGAAAGGCAGGTGCATGA
Upstream 100 bases:
>100_bases ACAAGGTTTGGTTGGAGCGCGGTGAGAATAGTGTCTCCATTTCGTTAGACGTAACGTTGCTGTTTGATGGCAGCGTTGAG CGCATCACAGGGCTTCGAGT
Downstream 100 bases:
>100_bases TGAATGGCGAATTCGTAACGACTTTACCGCCTTCAGCTTCAAAGCTTGAGCGCGTCTTAGAGCAGATATTTTGGGAAGAG ATTGGCTTGATTGAGCGCGA
Product: phage-related baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Phage Protein Gp; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGAN LQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATP ELCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA
Sequences:
>Translated_286_residues MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGAN LQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATP ELCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA >Mature_285_residues SQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGANL QHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPE LCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAAH VKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31766; Mature: 31635
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RQEFQDMSLDNMVAFSGGANLQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGA HHHHHHCCHHCEEEECCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCE YIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPELCQIVFDNLDAQTKRPLSD EEEEECCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCCCC RLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA CEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA HHCCCCHHHHHHHHHHHEEECCHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RQEFQDMSLDNMVAFSGGANLQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGA HHHHHHCCHHCEEEECCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCE YIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPELCQIVFDNLDAQTKRPLSD EEEEECCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCCCC RLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA CEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA HHCCCCHHHHHHHHHHHEEECCHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA