Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

Click here to switch to the map view.

The map label for this gene is 27363579

Identifier: 27363579

GI number: 27363579

Start: 90462

End: 91322

Strand: Reverse

Name: 27363579

Synonym: VV1_0095

Alternate gene names: NA

Gene position: 91322-90462 (Counterclockwise)

Preceding gene: 27363580

Following gene: 27363578

Centisome position: 2.78

GC content: 50.41

Gene sequence:

>861_bases
TTGAGTCAGATTGAAATTCCTCAGCTACCGCCACCGGAAGTGGTGAAACAACTCGATGCAGCAAGCATTCGAGCGCGCAT
GCTTAATCGCTATGCGCAGCTGATGGGTATCGATGCTCCAAAAGTGGGAGACCCACTCTACAACGCTTTTTCCGCTATGT
CTGAAGAAGTGACACGTGCTAGGCAAGAATTCCAAGACATGAGCTTGGATAACATGGTGGCATTTTCCGGTGGCGCGAAT
TTACAGCACTTAGGCGCTGCTCGCCCAGTTGAAAAATATGACACTGAAACGGATGAGCAATATCGCCGCCGCGTTCAGAT
GGCACCGGAAGGATTCAGTACTGCAGGGCCAGATGGCGCTTATATTTTCCACGCTTTGAATGCCCATGAAGATGTGCTCG
ATGCTTTCCCGCTTAACCCCATTGATCTGCAAATTCACCTTTATATCCTCAGTCGTAAAGATGAGGGTGTGGCGACACCA
GAGCTCTGCCAGATTGTTTTTGACAACCTCGATGCGCAAACCAAAAGGCCATTAAGCGATCGGCTATTTGTGCTACCTGC
TGAAATTTCCCGTTACCGAATAGAAGTTGCCCTGCATATGCCGACTGGCCCTGGCGAGCAACAAACGCTCCAGTTGGCAC
AGCAGCGTTTACAAAAGTTGGCAGATGATGCACACCGCTTGGGTGGCGATGTCTCGTTTTCCGCCATTTACGCTGCTGCC
CACGTAAAGCGCGACAGTGTAGACAGCGTTTACCAACCTGTTTCAAAAGTTGAGCTGATTGCCCCGCAGGAAGAGATCGC
CTGCTCCAAATCGCAAGCGCCATATTGCTATGAAATTGTGGTGAGAAAGGCAGGTGCATGA

Upstream 100 bases:

>100_bases
ACAAGGTTTGGTTGGAGCGCGGTGAGAATAGTGTCTCCATTTCGTTAGACGTAACGTTGCTGTTTGATGGCAGCGTTGAG
CGCATCACAGGGCTTCGAGT

Downstream 100 bases:

>100_bases
TGAATGGCGAATTCGTAACGACTTTACCGCCTTCAGCTTCAAAGCTTGAGCGCGTCTTAGAGCAGATATTTTGGGAAGAG
ATTGGCTTGATTGAGCGCGA

Product: phage-related baseplate assembly protein

Products: NA

Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Phage Protein Gp; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGAN
LQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATP
ELCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA
HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA

Sequences:

>Translated_286_residues
MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGAN
LQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATP
ELCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA
HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA
>Mature_285_residues
SQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRARQEFQDMSLDNMVAFSGGANL
QHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGAYIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPE
LCQIVFDNLDAQTKRPLSDRLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAAH
VKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA

Specific function: Unknown

COG id: COG3948

COG function: function code R; Phage-related baseplate assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31766; Mature: 31635

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RQEFQDMSLDNMVAFSGGANLQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGA
HHHHHHCCHHCEEEECCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCE
YIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPELCQIVFDNLDAQTKRPLSD
EEEEECCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCCCC
RLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA
CEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA
HHCCCCHHHHHHHHHHHEEECCHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SQIEIPQLPPPEVVKQLDAASIRARMLNRYAQLMGIDAPKVGDPLYNAFSAMSEEVTRA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RQEFQDMSLDNMVAFSGGANLQHLGAARPVEKYDTETDEQYRRRVQMAPEGFSTAGPDGA
HHHHHHCCHHCEEEECCCCCHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCE
YIFHALNAHEDVLDAFPLNPIDLQIHLYILSRKDEGVATPELCQIVFDNLDAQTKRPLSD
EEEEECCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCCCC
RLFVLPAEISRYRIEVALHMPTGPGEQQTLQLAQQRLQKLADDAHRLGGDVSFSAIYAAA
CEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HVKRDSVDSVYQPVSKVELIAPQEEIACSKSQAPYCYEIVVRKAGA
HHCCCCHHHHHHHHHHHEEECCHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA