Click here to switch to the map view.

The map label for this gene is yeaD [H]

Identifier: 270000567

GI number: 270000567

Start: 1977776

End: 1978990

Strand: Reverse

Name: yeaD [H]

Synonym: BA_2121

Alternate gene names: 270000567

Gene position: 1978990-1977776 (Counterclockwise)

Preceding gene: 30262143

Following gene: 30262141

Centisome position: 37.86

GC content: 36.05

Gene sequence:

>1215_bases
ATGAAACGCACGCTACGAGCACTATATCACGTTACGAAGTTATTACTAATCCCTTTATGCCTAGTGTTAACATTTGTGTA
TGCTATGCTTCAAGGAGGATTTGTAAGTTGGTTTTTATTTTACAGTATGGTTCCTATTGGTCTTTATTCACTTTTACTCC
CCTTCTACGCTTTACGGGGTGCTGAAGTAAAAAGAATAACAAATCAAAACGATTATGTAGCAGGAGAACGATTTGTAAGC
ACGATTACAATAAAAAGAAAATTTCCTTTCCCCTTACTTTATTTAGTTATAGAAGATGAACTGCCACCACACCTTACAAG
TTGTAGACAAACAAAGATGAATAAAACAATACTCTTTCCAGGATTAAAACGAAATATTTCGTTTCAATATGCAATTGACA
CAATCCCTAGAGGAGAGCACACTTTTTCAAGCGTACGAGTCAAAACTGGTGATCTATTCAGTATGATGGAGAAAGAAGTA
ACTTTTTCAGTTCCGGATACATTTTTAATCTATCCTCAGTATGTAGATATAACGTATCAGCAATTGGAAAACCATTTCGA
ACAAGGAGCGCTCTCAGCAAATATAAATTTCACAAAAGACTCTACCATTTCTGTCGGTTTGAGAGACTATAAACCTGGTG
ACCGCTTTTCATGGATTGATTGGAAAGCAACTGCAAGAACAAACAACATCATGACGAAAGAGTTTGAACAACAGCGTAGC
CATAATATTATGATATTCATAGACAGAACTGAGTCCCCTCTATTCGAATCAGTCGTCACATTTACTGCCTCTATTGTCAG
GGCTGTATTGAAGCAAAATTCACCAGCGTCATTTGTGTCTGTGGGAAAAGAACGAACTTTTTTCCCTTTAGACAATGGAG
ATAGTCAGTTGCAGCAAATCTTTTGTCATTTAGCGAAAGTACAAGCGGACAGTGTATTCCCGCTCTCCCAGAGTGTAGAA
ATGGAATTAAGAAAAGTTTATGAGCCCGTAACAATTATACTTGTGACAAGCGATCTTTCTCCCGATATTCAAAAGGCGGC
TGACTATACCGCTATACAAAATAGAAAATTACTAGTTTTTATTGTAAAAGAAAAACCAAATCAACTCTCACATCGAGAAC
TAAGTATTTTAGAAACTCTACAAAAACGAAAAATATTTGTAAATGTAGTTTATGGAAACCAGTATACAAACGTGTTTTTT
GAGGTGAGCAAATGA

Upstream 100 bases:

>100_bases
TAAAAATGGAAGCAAAATTTGAAGGAATAACAGGGGAACAAGTTATTTCAAAAATCGTTGCACGAACTACCGTGCCGACT
CAAAGGAAGATGAACCTTTA

Downstream 100 bases:

>100_bases
TAACATTACAGGCAAAAAAACAATGGGATATGACTAGATTTTTCATGCATGCATGCGCATTTCTACTTTTACTAGAATGG
ATACGACCCCTTATAGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGERFVS
TITIKRKFPFPLLYLVIEDELPPHLTSCRQTKMNKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV
TFSVPDTFLIYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGLRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS
HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE
MELRKVYEPVTIILVTSDLSPDIQKAADYTAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYGNQYTNVFF
EVSK

Sequences:

>Translated_404_residues
MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGERFVS
TITIKRKFPFPLLYLVIEDELPPHLTSCRQTKMNKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV
TFSVPDTFLIYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGLRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS
HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE
MELRKVYEPVTIILVTSDLSPDIQKAADYTAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYGNQYTNVFF
EVSK
>Mature_404_residues
MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGERFVS
TITIKRKFPFPLLYLVIEDELPPHLTSCRQTKMNKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV
TFSVPDTFLIYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGLRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS
HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE
MELRKVYEPVTIILVTSDLSPDIQKAADYTAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYGNQYTNVFF
EVSK

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 46596; Mature: 46596

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEVKRITNQNDYVAGERFVSTITIKRKFPFPLLYLVIEDELPPHLTSCRQTKMNKTILFP
CHHEEECCCCCCCCHHHEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCEEECC
GLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEVTFSVPDTFLIYPQYVDITYQ
CCCCCCEEEEEEECCCCCCCCHHEEEEECCHHHHHHHHHEEEECCCEEEEECCHHHHHHH
QLENHFEQGALSANINFTKDSTISVGLRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS
HHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHC
HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHH
FCHLAKVQADSVFPLSQSVEMELRKVYEPVTIILVTSDLSPDIQKAADYTAIQNRKLLVF
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCHHHCCCCEEEEE
IVKEKPNQLSHRELSILETLQKRKIFVNVVYGNQYTNVFFEVSK
EEECCCCCCCHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEVKRITNQNDYVAGERFVSTITIKRKFPFPLLYLVIEDELPPHLTSCRQTKMNKTILFP
CHHEEECCCCCCCCHHHEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCEEECC
GLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEVTFSVPDTFLIYPQYVDITYQ
CCCCCCEEEEEEECCCCCCCCHHEEEEECCHHHHHHHHHEEEECCCEEEEECCHHHHHHH
QLENHFEQGALSANINFTKDSTISVGLRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS
HHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHC
HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHH
FCHLAKVQADSVFPLSQSVEMELRKVYEPVTIILVTSDLSPDIQKAADYTAIQNRKLLVF
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCHHHCCCCEEEEE
IVKEKPNQLSHRELSILETLQKRKIFVNVVYGNQYTNVFFEVSK
EEECCCCCCCHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]